RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CCL3P10147 92 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 LINC00114Q6XXX2 140 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 CD59P13987 128 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 A8MZ25 164 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 TOMM6Q96B49 74 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 ZNF501Q96CX3 271 aaPredicted RBP4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 SELENOKQ9Y6D0 94 aa4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 TNRC6BQ9UPQ9 1833 aaKnown RBP4.28□□□□□ -1.72
TNRC6B-202ENST00000335727 FOXF1Q12946 379 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 MDS2Q8NDY4 140 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 TGFBR3LH3BV60 316 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 IL9P15248 144 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 TRBV10-3A0A0K0K1G6 114 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 GATA3P23771 443 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 NOTCH4Q99466 2003 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 RPS27P42677 84 aaKnown RBP4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 HCSTQ9UBK5 93 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 PLPPR2Q96GM1 343 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 C2CD3Q4AC94 2353 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 LOXL1Q08397 574 aaPredicted RBP4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 IGKV1D-42A0A075B6H8 117 aa4.27□□□□□ -1.73
TNRC6B-202ENST00000335727 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 PRR15Q8IV56 129 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 NUPR1O60356 82 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CACNA1AO00555 2505 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 C15orf65H3BRN8 121 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 C2orf66Q6UXQ4 117 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 TMEM202A6NGA9 273 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 LINC00158P58513 81 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CLEC19AQ6UXS0 136 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 WFDC9Q8NEX5 89 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 LHFPL6Q9Y693 200 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 VEGFBP49765 207 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 DAZ2Q13117 558 aaKnown RBP4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 LY6EQ16553 131 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 UPK3BQ9BT76 320 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 SPTY2D1-AS1A0A0U1RR47 76 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CSRP2Q16527 193 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 HIVEP3Q5T1R4 2406 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CLLU1OSQ5K130 101 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 MORN5Q5VZ52 161 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CPAMD8Q8IZJ3 1885 aa4.26□□□□□ -1.73
TNRC6B-202ENST00000335727 CYYR1Q96J86 154 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 CLPSL1A2RUU4 121 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 TMEM178BH3BS89 294 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 DSCAMO60469 2012 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 ZNF503Q96F45 646 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 NBL1P41271 181 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 ZNF138P52744 262 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 LIMD2Q9BT23 127 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 MRPL36Q9P0J6 103 aaKnown RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 RAI1Q7Z5J4 1906 aaPredicted RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 TRBV27A0A0K0K1C4 114 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 LST1O00453 97 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 PSPNO60542 156 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 RFESDQ8TAC1 157 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 C3orf36Q3SXR2 165 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 MYO18BQ8IUG5 2567 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 NTN3O00634 580 aaPredicted RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 CSRP1P21291 193 aaKnown RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 MRPL14Q6P1L8 145 aaKnown RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 DAZ4Q86SG3 579 aaKnown RBP4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 DEPPQ9NTK1 212 aa4.25□□□□□ -1.73
TNRC6B-202ENST00000335727 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 MALRD1Q5VYJ5 2156 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 NDUFA4O00483 81 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 A6NED7 52 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 ESRGQ1W209 222 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 MBD6Q96DN6 1003 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 COX14Q96I36 57 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 C7orf69Q9H7B7 122 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 M0R1W7 72 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 APELAP0DMC3 54 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 PIP4P1Q86T03 277 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 LYZL4Q96KX0 146 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 A0A0J9YX75 114 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 MIFP14174 115 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 UBE2E2Q96LR5 201 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 DEFB103AP81534 67 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 HAMPP81172 84 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 PTPRBP23467 1997 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 UBE2E1P51965 193 aa4.24□□□□□ -1.73
TNRC6B-202ENST00000335727 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms