RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 J3KRW8 73 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 ID1P41134 155 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 Q0VG73 95 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 KPRPQ5T749 579 aaPredicted RBP12.16□□□□□ -0.46
SHOX-201ENST00000334060 OR8A1Q8NGG7 326 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 RNF24Q9Y225 148 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 GTSCR1Q86UQ5 136 aa12.16□□□□□ -0.46
SHOX-201ENST00000334060 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 H3BMM0 161 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 PRR9Q5T870 116 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 NHLRC2Q8NBF2 726 aa12.15□□□□□ -0.46
SHOX-201ENST00000334060 M0R2Z0 102 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 PEX7O00628 323 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 CT45A10P0DMU9 189 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 AMTNQ6UX39 209 aa12.14□□□□□ -0.47
SHOX-201ENST00000334060 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
SHOX-201ENST00000334060 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 CLEC5AQ9NY25 188 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
SHOX-201ENST00000334060 MT-ND6P03923 174 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 PRM2P04554 102 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 SMIM15Q7Z3B0 74 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 LY96Q9Y6Y9 160 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 SPINK13Q1W4C9 94 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 TRPT1Q86TN4 253 aaKnown RBP12.12□□□□□ -0.47
SHOX-201ENST00000334060 LINC01551Q86U37 167 aa12.12□□□□□ -0.47
SHOX-201ENST00000334060 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
SHOX-201ENST00000334060 NPIPB6E9PJ23 425 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 RBMY1A1P0DJD3 496 aaKnown RBP12.11□□□□□ -0.47
SHOX-201ENST00000334060 RBMY1CP0DJD4 496 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 CRISP2P16562 243 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 RBX1P62877 108 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 RBMY1FQ15415 496 aaKnown RBP12.11□□□□□ -0.47
SHOX-201ENST00000334060 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
SHOX-201ENST00000334060 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
SHOX-201ENST00000334060 PPBPP02775 128 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 WDR73Q6P4I2 378 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 Q6ZWC4 215 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
SHOX-201ENST00000334060 COL7A1Q02388 2944 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 CSN1S1P47710 185 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 STHQ8IWL8 128 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 TMEM256Q8N2U0 113 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 C11orf52Q96A22 123 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 SFRP2Q96HF1 295 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 DNAH9Q9NYC9 4486 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
SHOX-201ENST00000334060 FRMD6-AS1P0C7T7 363 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 ZNF80P51504 273 aaPredicted RBP12.09□□□□□ -0.47
SHOX-201ENST00000334060 PMCHL1Q16048 86 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 Q86TA4 180 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 OR10J6PQ8NGY7 276 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
SHOX-201ENST00000334060 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 FAM19A4Q96LR4 140 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 IGF2BP2-AS1Q96M15 143 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 GNB1LQ9BYB4 327 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 RETNQ9HD89 108 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 ZNF492Q9P255 531 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 LAMTOR2Q9Y2Q5 125 aa12.08□□□□□ -0.48
SHOX-201ENST00000334060 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
SHOX-201ENST00000334060 CTRLP40313 264 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
SHOX-201ENST00000334060 PAM16Q9Y3D7 125 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 A8MTW9 85 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 IGLV2-8P01709 118 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
SHOX-201ENST00000334060 SAMD13Q5VXD3 122 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 BAGE3Q86Y29 109 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 IL36BQ9NZH7 164 aa12.07□□□□□ -0.48
SHOX-201ENST00000334060 CENPWQ5EE01 88 aa12.06□□□□□ -0.48
SHOX-201ENST00000334060 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
SHOX-201ENST00000334060 TMEM75Q8N9X5 138 aa12.06□□□□□ -0.48
SHOX-201ENST00000334060 KLF12Q9Y4X4 402 aa12.06□□□□□ -0.48
SHOX-201ENST00000334060 CRIP1P50238 77 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 ZNF138P52744 262 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms