RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 IGLL1P15814 213 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 TMEM238C9JI98 176 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 ZNF295-AS1Q8N0V1 137 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 WIPF2Q8TF74 440 aaPredicted RBP10.13□□□□□ -0.79
VSTM4-202ENST00000332853 M0R2P5 195 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 CEP350Q5VT06 3117 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 A0A1B0GV72 72 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 TSPAN13O95857 204 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 TTC32Q5I0X7 151 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
VSTM4-202ENST00000332853 TIMM21Q9BVV7 248 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 H3BUA1 57 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 APRG1Q8IVJ8 170 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 PRAC2D3DTV9 90 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 P0C879 139 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 DEFB1P60022 68 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 SNHG12Q9BXW3 62 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 I3L3M4 83 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 CKS1BP61024 79 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 TRAV8-2A0A0B4J237 113 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 FRMD6-AS1P0C7T7 363 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
VSTM4-202ENST00000332853 CHD3Q12873 2000 aaKnown RBP10.12□□□□□ -0.79
VSTM4-202ENST00000332853 DLEU1O43261 78 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
VSTM4-202ENST00000332853 C3orf56Q8N813 242 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 C20orf144Q9BQM9 153 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 FBXL19-AS1Q494R0 122 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 MSRB1Q9NZV6 116 aa10.11□□□□□ -0.79
VSTM4-202ENST00000332853 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
VSTM4-202ENST00000332853 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 IGLC2P0DOY2 106 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 IGLC3P0DOY3 106 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 DAZAP2Q15038 168 aaPredicted RBP10.1□□□□□ -0.79
VSTM4-202ENST00000332853 DKK2Q9UBU2 259 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 CGB3P0DN86 165 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 CGB7P0DN87 165 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 KIAA1549Q9HCM3 1950 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 BUB3O43684 328 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
VSTM4-202ENST00000332853 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
VSTM4-202ENST00000332853 LY6G5BQ8NDX9 201 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 RASL10AQ92737 203 aa10.1□□□□□ -0.79
VSTM4-202ENST00000332853 TRBV12-3P01733 135 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 A0A096LPF7 62 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 PRORYQ9H606 182 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 OTOGLQ3ZCN5 2332 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
VSTM4-202ENST00000332853 IGKV1D-37A0A075B6S9 117 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 CCL24O00175 119 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 PAX4O43316 350 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 CRYGCP07315 174 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 PMVKQ15126 192 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 A8MWV9 139 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 EIF4EBP1Q13541 118 aaPredicted RBP10.08□□□□□ -0.8
VSTM4-202ENST00000332853 KLF2Q9Y5W3 355 aaPredicted RBP10.08□□□□□ -0.8
VSTM4-202ENST00000332853 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 A0A087WW49 117 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
VSTM4-202ENST00000332853 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 PRIMA1Q86XR5 153 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 F5H768 121 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
VSTM4-202ENST00000332853 FANCD2OSQ96PS1 177 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 PYGO2Q9BRQ0 406 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 VWC2LB2RUY7 222 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
VSTM4-202ENST00000332853 RHODO00212 210 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 GAGE6Q13070 117 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
VSTM4-202ENST00000332853 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
VSTM4-202ENST00000332853 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 TMEM86BQ8N661 226 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
VSTM4-202ENST00000332853 INS-IGF2F8WCM5 200 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
VSTM4-202ENST00000332853 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
VSTM4-202ENST00000332853 CD5LO43866 347 aa10.05□□□□□ -0.8
VSTM4-202ENST00000332853 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
VSTM4-202ENST00000332853 DAD1P61803 113 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms