RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NRACQ8N912 160 aa11□□□□□ -0.65
TPM3-206ENST00000330188 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
TPM3-206ENST00000330188 K7EMT4 169 aa11□□□□□ -0.65
TPM3-206ENST00000330188 APRG1Q8IVJ8 170 aa11□□□□□ -0.65
TPM3-206ENST00000330188 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 NUDT3O95989 172 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 J3QLI3 93 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 Q6ZVH6 145 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 DEFB125Q8N687 156 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 MAPK1IP1LQ8NDC0 245 aa10.99□□□□□ -0.65
TPM3-206ENST00000330188 FGF6P10767 208 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 SRD5A1P18405 259 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 KIR3DS1Q14943 382 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 ANXA2RQ3ZCQ2 193 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 ORAOV1Q8WV07 137 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 TMEM158Q8WZ71 300 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
TPM3-206ENST00000330188 TRBV7-9A0A0J9YWB2 115 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 TGFAP01135 160 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 COX6B1P14854 86 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 RNASE4P34096 147 aaKnown RBP10.97□□□□□ -0.65
TPM3-206ENST00000330188 ZNF124Q15973 351 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 BBC3Q96PG8 261 aaPredicted RBP10.97□□□□□ -0.65
TPM3-206ENST00000330188 DKK2Q9UBU2 259 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 CRYBG3Q68DQ2 2970 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 SPRY2O43597 315 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 ASIPP42127 132 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 MRAP2Q96G30 205 aa10.97□□□□□ -0.65
TPM3-206ENST00000330188 S100A4P26447 101 aaKnown RBP10.96□□□□□ -0.65
TPM3-206ENST00000330188 SRSF1Q07955 248 aaKnown RBP eCLIP10.96□□□□□ -0.652e-7■□□□□ 8.7
TPM3-206ENST00000330188 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
TPM3-206ENST00000330188 DCANP1Q8TF63 244 aa10.96□□□□□ -0.65
TPM3-206ENST00000330188 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.66
TPM3-206ENST00000330188 TMEM89A2RUT3 159 aa10.96□□□□□ -0.66
TPM3-206ENST00000330188 M0R381 172 aa10.96□□□□□ -0.66
TPM3-206ENST00000330188 MED14OSP0DP75 135 aa10.96□□□□□ -0.66
TPM3-206ENST00000330188 ACACBO00763 2458 aa10.95□□□□□ -0.66
TPM3-206ENST00000330188 CSPG4Q6UVK1 2322 aa10.95□□□□□ -0.66
TPM3-206ENST00000330188 CD5LO43866 347 aa10.95□□□□□ -0.66
TPM3-206ENST00000330188 ODF1Q14990 250 aa10.95□□□□□ -0.66
TPM3-206ENST00000330188 A1L4Q6 167 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 GNRH2O43555 120 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 ID1P41134 155 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 LAGE3Q14657 143 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 KLLNB2CW77 178 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 FSHBP01225 129 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
TPM3-206ENST00000330188 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
TPM3-206ENST00000330188 FBN2P35556 2912 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 TCTAP57738 103 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 SAMD13Q5VXD3 122 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 DPH3P1Q9H4G8 78 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 VPREB3Q9UKI3 123 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 CR1P17927 2039 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 MAP1AP78559 2803 aaPredicted RBP10.93□□□□□ -0.66
TPM3-206ENST00000330188 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 PRSS1P07477 247 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
TPM3-206ENST00000330188 IGHV4-31P0DP07 118 aa10.92□□□□□ -0.66
TPM3-206ENST00000330188 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
TPM3-206ENST00000330188 C14orf178Q8N769 122 aaPredicted RBP10.92□□□□□ -0.66
TPM3-206ENST00000330188 RASL10AQ92737 203 aa10.92□□□□□ -0.66
TPM3-206ENST00000330188 FOXC2Q99958 501 aa10.92□□□□□ -0.66
TPM3-206ENST00000330188 ATP5LO75964 103 aa10.91□□□□□ -0.66
TPM3-206ENST00000330188 Q6YL49 198 aa10.91□□□□□ -0.66
TPM3-206ENST00000330188 ZNF702PQ9H963 129 aa10.91□□□□□ -0.66
TPM3-206ENST00000330188 ANKRD17O75179 2603 aaKnown RBP10.91□□□□□ -0.66
TPM3-206ENST00000330188 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
TPM3-206ENST00000330188 USP24Q9UPU5 2620 aa10.91□□□□□ -0.66
TPM3-206ENST00000330188 NXPH4O95158 308 aa10.9□□□□□ -0.66
TPM3-206ENST00000330188 MYOZ3Q8TDC0 251 aa10.9□□□□□ -0.66
TPM3-206ENST00000330188 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
TPM3-206ENST00000330188 HHLA3Q9XRX5 114 aa10.9□□□□□ -0.66
TPM3-206ENST00000330188 MYO18BQ8IUG5 2567 aa10.9□□□□□ -0.66
TPM3-206ENST00000330188 MUC4Q99102 2169 aa10.9□□□□□ -0.66
TPM3-206ENST00000330188 CCL25O15444 150 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 IGKCP01834 107 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.67
TPM3-206ENST00000330188 NMUP48645 174 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 SUMO2P61956 95 aaKnown RBP10.9□□□□□ -0.67
TPM3-206ENST00000330188 TMEM97Q5BJF2 176 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 PCP2Q8IVA1 136 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 AP1S3Q96PC3 154 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 C20orf78Q9BR46 151 aa10.9□□□□□ -0.67
TPM3-206ENST00000330188 SIVA1O15304 175 aa10.89□□□□□ -0.67
TPM3-206ENST00000330188 ELANEP08246 267 aa10.89□□□□□ -0.67
TPM3-206ENST00000330188 MGPP08493 103 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 258.6 ms