RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 Q0VG73 95 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 ATRQ13535 2644 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 LY6LH3BQJ8 138 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 SYS1-DBNDD2H3BUS1 97 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 TNFRSF13BO14836 293 aaPredicted RBP12.4□□□□□ -0.42
SYNM-201ENST00000328642 SLURP1P55000 103 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 DNLZQ5SXM8 178 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 STHQ8IWL8 128 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 AGRNO00468 2067 aa12.4□□□□□ -0.42
SYNM-201ENST00000328642 IGHV3-16A0A0C4DH30 117 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 HTN3P15516 51 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 AVPP01185 164 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 CRYGBP07316 175 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
SYNM-201ENST00000328642 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 FAM104BQ5XKR9 115 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 CCDC140Q96MF4 163 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 ZNF492Q9P255 531 aa12.39□□□□□ -0.43
SYNM-201ENST00000328642 IGF1P05019 195 aa12.38□□□□□ -0.43
SYNM-201ENST00000328642 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
SYNM-201ENST00000328642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.38□□□□□ -0.43
SYNM-201ENST00000328642 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
SYNM-201ENST00000328642 IGHV1-24A0A0C4DH33 117 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 J3QKU1 62 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 ZNF80P51504 273 aaPredicted RBP12.37□□□□□ -0.43
SYNM-201ENST00000328642 Q6ZVH6 145 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 A0A1B0GW15 77 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 IGLC2P0DOY2 106 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 CFHR3Q02985 330 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 DEFB113Q30KQ7 82 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 MPV17L2Q567V2 206 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
SYNM-201ENST00000328642 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 F8P00451 2351 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
SYNM-201ENST00000328642 NDUFA4O00483 81 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 HOXD3P31249 432 aaPredicted RBP12.36□□□□□ -0.43
SYNM-201ENST00000328642 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 SIGLEC8Q9NYZ4 499 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
SYNM-201ENST00000328642 CHCHD1Q96BP2 118 aaKnown RBP12.36□□□□□ -0.43
SYNM-201ENST00000328642 BBC3Q96PG8 261 aaPredicted RBP12.36□□□□□ -0.43
SYNM-201ENST00000328642 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 ST20Q9HBF5 79 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 PLP1P60201 277 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 CSTL1Q9H114 145 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 WI2-2373I1.2A0A1W2PRP0 233 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
SYNM-201ENST00000328642 ASH1LQ9NR48 2969 aaKnown RBP12.35□□□□□ -0.43
SYNM-201ENST00000328642 IGLL1P15814 213 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 OR2K2Q8NGT1 345 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 GATA3P23771 443 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 RASL11AQ6T310 242 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
SYNM-201ENST00000328642 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 HERVK_113P61574 105 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
SYNM-201ENST00000328642 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNM-201ENST00000328642 ZC2HC1BQ5TFG8 222 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 Q6ZQT7 251 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 KLF2Q9Y5W3 355 aaPredicted RBP12.33□□□□□ -0.44
SYNM-201ENST00000328642 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 PPBPP02775 128 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 MS4A6AQ9H2W1 248 aa12.33□□□□□ -0.44
SYNM-201ENST00000328642 PSMB2P49721 201 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 YPEL4Q96NS1 127 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 IGHV4OR15-8A0A075B7B6 117 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 A0A087WW49 117 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 APOMO95445 188 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
SYNM-201ENST00000328642 COTL1Q14019 142 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
SYNM-201ENST00000328642 ATP5LO75964 103 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 CT83Q5H943 113 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 PET117Q6UWS5 81 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 IGHV3-38A0A0C4DH36 116 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 A6NDN8 102 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 LAGE3Q14657 143 aa12.31□□□□□ -0.44
SYNM-201ENST00000328642 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
SYNM-201ENST00000328642 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms