RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 A0A087WTM6 91 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 CDC34P49427 236 aaPredicted RBP8.35□□□□□ -1.07
TPM3-204ENST00000323144 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
TPM3-204ENST00000323144 DEFA1P59665 94 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 DEFA3P59666 94 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 SLAQ13239 276 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 IQCF2Q8IXL9 164 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 SH3BGRL3Q9H299 93 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 TREM1Q9NP99 234 aa8.35□□□□□ -1.07
TPM3-204ENST00000323144 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 A0A1W2PPV4 95 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 C9JCJ5 164 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 M0R2P5 195 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
TPM3-204ENST00000323144 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 HAMPP81172 84 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 DPPA3Q6W0C5 159 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 OR10G9Q8NGN4 311 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 OR10G7Q8NGN6 311 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 SDF2L1Q9HCN8 221 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
TPM3-204ENST00000323144 ORM1P02763 201 aa8.33□□□□□ -1.08
TPM3-204ENST00000323144 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
TPM3-204ENST00000323144 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
TPM3-204ENST00000323144 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 IGLV2-11P01706 119 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 TCRAP04437 139 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 CRYGDP07320 174 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 STAG3L2P0CL84 134 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 STAG3L3P0CL85 134 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 ATP6V0CP27449 155 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 GCHFRP30047 84 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 PPT1P50897 306 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 XGP55808 180 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 NFE4Q86UQ8 179 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 C5orf17Q8NAS9 161 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 OR2G3Q8NGZ4 309 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 FAT1Q14517 4588 aa8.32□□□□□ -1.08
TPM3-204ENST00000323144 FBLL1A6NHQ2 334 aaKnown RBP8.31□□□□□ -1.08
TPM3-204ENST00000323144 EREGO14944 169 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 GCGP01275 180 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 EVI2AP22794 236 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 Q5BKY6 102 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 Q8N3U1 123 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 C9orf85Q96MD7 179 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 AQP10Q96PS8 301 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 NDFIP1Q9BT67 221 aa8.31□□□□□ -1.08
TPM3-204ENST00000323144 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 PSMG3Q9BT73 122 aaPredicted RBP8.3□□□□□ -1.08
TPM3-204ENST00000323144 PSG8Q9UQ74 426 aa8.3□□□□□ -1.08
TPM3-204ENST00000323144 TRAV9-2A0A087WT02 112 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 RNF222A6NCQ9 220 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 RS1O15537 224 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
TPM3-204ENST00000323144 FLI1Q01543 452 aaPredicted RBP8.29□□□□□ -1.08
TPM3-204ENST00000323144 RHOHQ15669 191 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 Q5VSD8 79 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 ARL6IP6Q8N6S5 226 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 Q9HAA7 133 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
TPM3-204ENST00000323144 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 TRAV34A0A0B4J273 112 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-38A0A0C4DH36 116 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 SERTM2A0A1B0GWG4 89 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 TIRAPP58753 221 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 LINC01556Q5JQF7 62 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 Q86TA4 180 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
TPM3-204ENST00000323144 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 PTTG1O95997 202 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 SUMO1P63165 101 aaKnown RBP8.27□□□□□ -1.09
TPM3-204ENST00000323144 WFDC2Q14508 124 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 ZFP69Q49AA0 526 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 SMUG1Q53HV7 270 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 RPL7L1Q6DKI1 246 aaKnown RBP8.27□□□□□ -1.09
TPM3-204ENST00000323144 Q6ZSN1 163 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms