RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 SPTA1P02549 2419 aa19.28■□□□□ 0.68
SENP3-201ENST00000321337 M0R381 172 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 RRN3P1Q2M238 152 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 PRO0461Q9UI25 63 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 F8VRH5 84 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 PLNP26678 52 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 AJUBAQ96IF1 538 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 SIGMAR1Q99720 223 aa19.27■□□□□ 0.68
SENP3-201ENST00000321337 H7C1H1 209 aa19.26■□□□□ 0.67
SENP3-201ENST00000321337 TAL2Q16559 108 aa19.26■□□□□ 0.67
SENP3-201ENST00000321337 RASL10AQ92737 203 aa19.26■□□□□ 0.67
SENP3-201ENST00000321337 SCGB3A1Q96QR1 104 aa19.26■□□□□ 0.67
SENP3-201ENST00000321337 CHTOPQ9Y3Y2 248 aaKnown RBP19.26■□□□□ 0.67
SENP3-201ENST00000321337 CD300EQ496F6 205 aaPredicted RBP19.25■□□□□ 0.67
SENP3-201ENST00000321337 IGHV4-4A0A075B6R2 117 aa19.25■□□□□ 0.67
SENP3-201ENST00000321337 MYMXA0A1B0GTQ4 84 aa19.25■□□□□ 0.67
SENP3-201ENST00000321337 C9orf47Q6ZRZ4 202 aa19.25■□□□□ 0.67
SENP3-201ENST00000321337 MORN3Q6PF18 240 aaPredicted RBP19.24■□□□□ 0.67
SENP3-201ENST00000321337 LINC00527Q9UJ94 153 aa19.24■□□□□ 0.67
SENP3-201ENST00000321337 CELSR1Q9NYQ6 3014 aa19.24■□□□□ 0.67
SENP3-201ENST00000321337 OR11H12B2RN74 326 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 LGALS1P09382 135 aaKnown RBP19.23■□□□□ 0.67
SENP3-201ENST00000321337 RAB9AP51151 201 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 SFTA2Q6UW10 78 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 C14orf178Q8N769 122 aaPredicted RBP19.23■□□□□ 0.67
SENP3-201ENST00000321337 OR11H1Q8NG94 326 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 OR11H2Q8NH07 326 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 GAGE13Q4V321 117 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 NEXN-AS1Q8NBZ9 246 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 METTL26Q96S19 204 aa19.23■□□□□ 0.67
SENP3-201ENST00000321337 MINOS1Q5TGZ0 78 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 MINOS1-NBL1R4GNA1 71 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 RNF223E7ERA6 249 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 CCL21O00585 134 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 ATP5G2Q06055 141 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 C16orf92Q96LL3 132 aa19.22■□□□□ 0.67
SENP3-201ENST00000321337 PLEKHB2Q96CS7 222 aa19.21■□□□□ 0.67
SENP3-201ENST00000321337 SIRPDQ9H106 197 aa19.21■□□□□ 0.67
SENP3-201ENST00000321337 TRAV12-1A0A0B4J245 112 aa19.21■□□□□ 0.67
SENP3-201ENST00000321337 SUMO2P61956 95 aaKnown RBP19.21■□□□□ 0.67
SENP3-201ENST00000321337 C11orf71Q6IPW1 123 aa19.21■□□□□ 0.67
SENP3-201ENST00000321337 TOMM6Q96B49 74 aa19.21■□□□□ 0.67
SENP3-201ENST00000321337 OOSP1A8MZH6 123 aa19.21■□□□□ 0.66
SENP3-201ENST00000321337 CLEC2AQ6UVW9 174 aa19.21■□□□□ 0.66
SENP3-201ENST00000321337 SPTBN1Q01082 2364 aaKnown RBP19.2■□□□□ 0.66
SENP3-201ENST00000321337 PRSS29PA6NIE9 313 aa19.2■□□□□ 0.66
SENP3-201ENST00000321337 BAALCQ8WXS3 180 aa19.2■□□□□ 0.66
SENP3-201ENST00000321337 MRAP2Q96G30 205 aa19.2■□□□□ 0.66
SENP3-201ENST00000321337 A0A1B0GWB2 263 aa19.2■□□□□ 0.66
SENP3-201ENST00000321337 PRADC1Q9BSG0 188 aa19.2■□□□□ 0.66
SENP3-201ENST00000321337 HIF1ANQ9NWT6 349 aa19.19■□□□□ 0.66
SENP3-201ENST00000321337 U3KQE9 123 aa19.19■□□□□ 0.66
SENP3-201ENST00000321337 PGPEP1Q9NXJ5 209 aa19.19■□□□□ 0.66
SENP3-201ENST00000321337 RAXQ9Y2V3 346 aa19.19■□□□□ 0.66
SENP3-201ENST00000321337 MGPP08493 103 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 SAA4P35542 130 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 C1orf122Q6ZSJ8 110 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 KLHL30-AS1Q8NEE0 82 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 EEF1AKMT3Q96AZ1 226 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 C2orf66Q6UXQ4 117 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 ZFAND2AQ8N6M9 145 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
SENP3-201ENST00000321337 PTPRQQ9UMZ3 2332 aa19.18■□□□□ 0.66
SENP3-201ENST00000321337 EMP1P54849 157 aa19.17■□□□□ 0.66
SENP3-201ENST00000321337 TMEM219Q86XT9 240 aa19.17■□□□□ 0.66
SENP3-201ENST00000321337 SPATA25Q9BR10 227 aa19.17■□□□□ 0.66
SENP3-201ENST00000321337 GPHB5Q86YW7 130 aa19.17■□□□□ 0.66
SENP3-201ENST00000321337 MRPL53Q96EL3 112 aaKnown RBP19.17■□□□□ 0.66
SENP3-201ENST00000321337 HOXA3O43365 443 aaPredicted RBP19.16■□□□□ 0.66
SENP3-201ENST00000321337 CIDEAO60543 219 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 F6UB75 175 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 GNRH2O43555 120 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 TRBV12-3P01733 135 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 SMCPP49901 116 aaPredicted RBP19.16■□□□□ 0.66
SENP3-201ENST00000321337 AKAP6Q13023 2319 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 ORMDL2Q53FV1 153 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 UNQ9165/PRO28630Q6UXU0 137 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 GLMPQ8WWB7 406 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 C20orf78Q9BR46 151 aa19.16■□□□□ 0.66
SENP3-201ENST00000321337 A0A1W2PPR1 153 aa19.15■□□□□ 0.66
SENP3-201ENST00000321337 SLC25A16P16260 332 aa19.15■□□□□ 0.66
SENP3-201ENST00000321337 ITLN2Q8WWU7 325 aaPredicted RBP19.15■□□□□ 0.66
SENP3-201ENST00000321337 VPS13CQ709C8 3753 aa19.15■□□□□ 0.66
SENP3-201ENST00000321337 ANXA2RQ3ZCQ2 193 aa19.15■□□□□ 0.66
SENP3-201ENST00000321337 ZNF815PA8K554 130 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 S100A4P26447 101 aaKnown RBP19.14■□□□□ 0.65
SENP3-201ENST00000321337 LINC01549A6NIU2 74 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 TCF15Q12870 199 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 KLK9Q2XQG4 91 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 FBXL19-AS1Q494R0 122 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 KLK9Q9UKQ9 250 aa19.14■□□□□ 0.65
SENP3-201ENST00000321337 ZFP2Q6ZN57 461 aa19.13■□□□□ 0.65
SENP3-201ENST00000321337 MRPL16Q9NX20 251 aaKnown RBP19.13■□□□□ 0.65
SENP3-201ENST00000321337 DUSP14O95147 198 aaKnown RBP19.13■□□□□ 0.65
SENP3-201ENST00000321337 ADORA2A-AS1P86434 159 aa19.13■□□□□ 0.65
SENP3-201ENST00000321337 SCGB2A2Q13296 93 aa19.13■□□□□ 0.65
SENP3-201ENST00000321337 IGKV3-7A0A075B6H7 116 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 J3QR89 54 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 DPH3P1Q9H4G8 78 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 PHLDA3Q9Y5J5 127 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms