RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SYNJ2BPP57105 145 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 SAMD5Q5TGI4 173 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 FA2HQ7L5A8 372 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 TMEM70Q9BUB7 260 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 CNFNQ9BYD5 112 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 TMEM191AQ9H0A3 160 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 UFC1Q9Y3C8 167 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 NCR2O95944 276 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 OR8A1Q8NGG7 326 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 OR10AG1Q8NH19 301 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 LENEPQ9Y5L5 61 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 CR1P17927 2039 aa5.71□□□□□ -1.49
IFT88-201ENST00000319980 ELANEP08246 267 aa5.71□□□□□ -1.49
IFT88-201ENST00000319980 KIR3DS1Q14943 382 aa5.71□□□□□ -1.49
IFT88-201ENST00000319980 ZNF705AQ6ZN79 300 aaPredicted RBP5.71□□□□□ -1.49
IFT88-201ENST00000319980 C20orf144Q9BQM9 153 aa5.71□□□□□ -1.49
IFT88-201ENST00000319980 IGHV4OR15-8A0A075B7B6 117 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 A0A087WW49 117 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 H0Y8G0 127 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 RAB4AP20338 218 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 EVI2AP22794 236 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 SPATA45Q537H7 98 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 KHDC1LQ5JSQ8 128 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 SPATA12Q7Z6I5 190 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 DCANP1Q8TF63 244 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 SIGLEC8Q9NYZ4 499 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 U3KQK5 164 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 GAS8-AS1O95177 125 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 NPYP01303 97 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 LGALS1P09382 135 aaKnown RBP5.71□□□□□ -1.5
IFT88-201ENST00000319980 OR5AL1P0C617 328 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 RNASE4P34096 147 aaKnown RBP5.71□□□□□ -1.5
IFT88-201ENST00000319980 WFDC12Q8WWY7 111 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 RNF185Q96GF1 192 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 UBE2E2Q96LR5 201 aa5.71□□□□□ -1.5
IFT88-201ENST00000319980 PDZD2O15018 2839 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 TRAV21A0A0B4J279 112 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 SYS1-DBNDD2H3BUS1 97 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 H3BVH4 76 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 HOXD3P31249 432 aaPredicted RBP5.7□□□□□ -1.5
IFT88-201ENST00000319980 ID1P41134 155 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 FXYD7P58549 80 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 SPANXN1Q5VSR9 72 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 MIEN1Q9BRT3 115 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 MCRIP2Q9BUT9 160 aaKnown RBP5.7□□□□□ -1.5
IFT88-201ENST00000319980 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 FLNAP21333 2647 aaKnown RBP5.7□□□□□ -1.5
IFT88-201ENST00000319980 SPRY2O43597 315 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 ZNF688P0C7X2 276 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 DEFB136Q30KP8 78 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 KLHDC1Q8N7A1 406 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 MAP1LC3CQ9BXW4 147 aa5.7□□□□□ -1.5
IFT88-201ENST00000319980 CRXO43186 299 aaPredicted RBP5.69□□□□□ -1.5
IFT88-201ENST00000319980 S100A4P26447 101 aaKnown RBP5.69□□□□□ -1.5
IFT88-201ENST00000319980 RIPPLY3P57055 190 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 PSMG4Q5JS54 123 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 C18orf65Q6ZTR6 163 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 MYOZ3Q8TDC0 251 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 HSPB8Q9UJY1 196 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 ACANP16112 2415 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 HECTD1Q9ULT8 2610 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 TCF21O43680 179 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 GATA1P15976 413 aaPredicted RBP5.69□□□□□ -1.5
IFT88-201ENST00000319980 ANXA2RQ3ZCQ2 193 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 HIST2H2BDQ6DRA6 164 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 SMIM15Q7Z3B0 74 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
IFT88-201ENST00000319980 OR4C46A6NHA9 309 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 M0R381 172 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 PPBPP02775 128 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 PMCHL2Q9BQD1 86 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 C1orf43Q9BWL3 253 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 CDIP1Q9H305 208 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 MAST4O15021 2626 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 FLNBO75369 2602 aaKnown RBP5.68□□□□□ -1.5
IFT88-201ENST00000319980 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 TRAV9-2A0A087WT02 112 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 A0A096LNJ9 63 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 TRAV26-2A0A0B4J265 109 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 GNRH2O43555 120 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 SNAI2O43623 268 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 SNRPD3P62318 126 aaKnown RBP5.68□□□□□ -1.5
IFT88-201ENST00000319980 SAMD13Q5VXD3 122 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 DUX3Q96PT4 197 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 ZNF747Q9BV97 191 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 ITPR2Q14571 2701 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 SORL1Q92673 2214 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 C20orf202A1L168 122 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 LGALS9O00182 355 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 IGLL1P15814 213 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 SLURP1P55000 103 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 Q8N2B8 174 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 MAP1LC3AQ9H492 121 aa5.68□□□□□ -1.5
IFT88-201ENST00000319980 IGLC3P0DOY3 106 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 ASIPP42127 132 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms