RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 C19orf71A6NCJ1 209 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 CBY3A6NI87 242 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 PNRC1Q12796 327 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 SVBPQ8N300 66 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 CLRN3Q8NCR9 226 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 LY96Q9Y6Y9 160 aa11.19□□□□□ -0.62
PDLIM5-202ENST00000318007 LOC105371267A0A1B0GV96 52 aa11.18□□□□□ -0.62
PDLIM5-202ENST00000318007 DEFB4AO15263 64 aa11.18□□□□□ -0.62
PDLIM5-202ENST00000318007 AZU1P20160 251 aa11.18□□□□□ -0.62
PDLIM5-202ENST00000318007 EMP1P54849 157 aa11.18□□□□□ -0.62
PDLIM5-202ENST00000318007 TENM3Q9P273 2699 aa11.18□□□□□ -0.62
PDLIM5-202ENST00000318007 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 GATCO43716 136 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 C15orf54Q8N8G6 183 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 RCHY1Q96PM5 261 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 TMA7Q9Y2S6 64 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 IGHV1OR15-1A0A075B7D0 117 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 KIR2DL5BA0A0G2JN68 375 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 KIR2DL5BA0A0G2JPC4 375 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 KIR2DL5AQ8N109 375 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 KIR2DL5BQ8NHK3 375 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 RPP21Q9H633 154 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
PDLIM5-202ENST00000318007 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 H7BYZ3 331 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 SCO1O75880 301 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 AMBPP02760 352 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 TYMSP04818 313 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 A8MZ25 164 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 SPINK4O60575 86 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 SNAPINO95295 136 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 V9GYV3 84 aa11.16□□□□□ -0.62
PDLIM5-202ENST00000318007 H3BVH4 76 aa11.15□□□□□ -0.62
PDLIM5-202ENST00000318007 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-202ENST00000318007 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 OSTCQ9NRP0 149 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 MT-ND4LP03901 98 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 ZNF705AQ6ZN79 300 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 PYGO2Q9BRQ0 406 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
PDLIM5-202ENST00000318007 FAM3BP58499 235 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-202ENST00000318007 CTAG1AP78358 180 aa11.13□□□□□ -0.63
PDLIM5-202ENST00000318007 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
PDLIM5-202ENST00000318007 X6R8D5 127 aa11.13□□□□□ -0.63
PDLIM5-202ENST00000318007 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 Q6ZWC4 215 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 NEU1Q99519 415 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 ASIPP42127 132 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 RHEBQ15382 184 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 RNF183Q96D59 192 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 HUWE1Q7Z6Z7 4374 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-202ENST00000318007 HIGD1CA8MV81 97 aa11.11□□□□□ -0.63
PDLIM5-202ENST00000318007 UBE2CO00762 179 aa11.11□□□□□ -0.63
PDLIM5-202ENST00000318007 ARMS2P0C7Q2 107 aa11.11□□□□□ -0.63
PDLIM5-202ENST00000318007 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
PDLIM5-202ENST00000318007 C20orf144Q9BQM9 153 aa11.11□□□□□ -0.63
PDLIM5-202ENST00000318007 RNASE3P12724 160 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 DNAH9Q9NYC9 4486 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 M0R381 172 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 TDRG1Q3Y452 100 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 FER1L6-AS1Q8NA97 138 aa11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-202ENST00000318007 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 A8MWL6 223 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 NOP10Q9NPE3 64 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 FBN3Q75N90 2809 aa11.09□□□□□ -0.63
PDLIM5-202ENST00000318007 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 TMEM263Q8WUH6 116 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 IL36BQ9NZH7 164 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
PDLIM5-202ENST00000318007 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 ZNF415Q09FC8 603 aa11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 MRPL54Q6P161 138 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms