RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 TACC2O95359 2948 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
CDHR3-201ENST00000317716 NBR2O15453 112 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 COX6CP09669 75 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 GP9P14770 177 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 ADIPOQQ15848 244 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 LINC00477Q96M19 166 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 DPM3Q9P2X0 92 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 AGRNO00468 2067 aa5.94□□□□□ -1.46
CDHR3-201ENST00000317716 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 PVRIGQ6DKI7 326 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 C10orf126Q8N4M7 172 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 PRR25Q96S07 402 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 IGHV3-73A0A0B4J1V6 119 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 H7C1H1 209 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 RNASE1P07998 156 aaKnown RBP5.93□□□□□ -1.46
CDHR3-201ENST00000317716 FOXI2Q6ZQN5 318 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 C1orf162Q8NEQ5 155 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-201ENST00000317716 RNF183Q96D59 192 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 ZNF48Q96MX3 618 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-201ENST00000317716 ASIPP42127 132 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 RUSC1-AS1Q66K80 236 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-201ENST00000317716 ERG28Q9UKR5 140 aa5.93□□□□□ -1.46
CDHR3-201ENST00000317716 IGKV1D-37A0A075B6S9 117 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 GAS8-AS1O95177 125 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 TRGV3P03979 118 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 DEFB1P60022 68 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 C15orf32Q32M92 178 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 CCDC144NLQ6NUI1 221 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 NCKAP5O14513 1909 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 HIST2H2BCQ6DN03 193 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 LRBAP50851 2863 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 IGHV3OR16-12A0A075B7B8 117 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 APOBEC3AP31941 199 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-201ENST00000317716 EIF4EBP1Q13541 118 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-201ENST00000317716 C16orf54Q6UWD8 224 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 FAM159AQ6UWV7 190 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 C2orf66Q6UXQ4 117 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 Q8NA96 180 aa5.92□□□□□ -1.46
CDHR3-201ENST00000317716 ZNF625Q96I27 306 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-201ENST00000317716 TMEM178BH3BS89 294 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 IGKV1-17P01599 117 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 GRNP28799 593 aaKnown RBP5.91□□□□□ -1.46
CDHR3-201ENST00000317716 TMEM219Q86XT9 240 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 NTN5Q8WTR8 489 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-201ENST00000317716 PRRC2AP48634 2157 aaKnown RBP5.91□□□□□ -1.46
CDHR3-201ENST00000317716 A0A0G2JNJ9 132 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 MYMXA0A1B0GTQ4 84 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 C19orf71A6NCJ1 209 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 CD7P09564 240 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 PLNP26678 52 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 ZFP2Q6ZN57 461 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 ZNF833PQ6ZTB9 187 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 FAM57AQ8TBR7 257 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 RNASE6Q93091 150 aaKnown RBP5.91□□□□□ -1.46
CDHR3-201ENST00000317716 PLSCR4Q9NRQ2 329 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 Q9UFV3 132 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 SMPXQ9UHP9 88 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 COL5A1P20908 1838 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-201ENST00000317716 TRAV8-3A0A0A6YYJ7 113 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 TEX36Q5VZQ5 186 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 DYNAPQ8N1N2 210 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 ZNF491Q8N8L2 437 aa5.91□□□□□ -1.46
CDHR3-201ENST00000317716 CPAMD8Q8IZJ3 1885 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 PRAC2D3DTV9 90 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 POU2AF1Q16633 256 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.46
CDHR3-201ENST00000317716 SIGLEC15Q6ZMC9 328 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 THAP8Q8NA92 274 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 PPDPFLQ8WWR9 84 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 ANKRD17O75179 2603 aaKnown RBP5.9□□□□□ -1.46
CDHR3-201ENST00000317716 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-201ENST00000317716 ODF1Q14990 250 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 MEIG1Q5JSS6 88 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 C2orf82Q6UX34 121 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 CFHR4Q92496 578 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 RPL39LQ96EH5 51 aaKnown RBP5.9□□□□□ -1.46
CDHR3-201ENST00000317716 SPXQ9BT56 116 aa5.9□□□□□ -1.46
CDHR3-201ENST00000317716 TMEM30BQ3MIR4 351 aa5.9□□□□□ -1.47
CDHR3-201ENST00000317716 C1QTNF4Q9BXJ3 329 aa5.9□□□□□ -1.47
CDHR3-201ENST00000317716 TP53TG1Q9Y2A0 90 aa5.9□□□□□ -1.47
CDHR3-201ENST00000317716 KLF12Q9Y4X4 402 aa5.9□□□□□ -1.47
CDHR3-201ENST00000317716 ADAMTS20P59510 1910 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 TMEM262E9PQX1 116 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 BUB1B-PAK6H3BSN5 160 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-201ENST00000317716 MLST8Q9BVC4 326 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-201ENST00000317716 HIVEP2P31629 2446 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 IGLV3-9A0A075B6K5 115 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 F8VRH5 84 aa5.89□□□□□ -1.47
CDHR3-201ENST00000317716 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-201ENST00000317716 FOXI1Q12951 378 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms