RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 FAM19A4Q96LR4 140 aa11.76□□□□□ -0.53
CALR-201ENST00000316448 C11orf21Q9P2W6 132 aa11.76□□□□□ -0.53
CALR-201ENST00000316448 WNK1Q9H4A3 2382 aa11.75□□□□□ -0.53
CALR-201ENST00000316448 M0QZ24 198 aa11.75□□□□□ -0.53
CALR-201ENST00000316448 PRR9Q5T870 116 aa11.75□□□□□ -0.53
CALR-201ENST00000316448 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
CALR-201ENST00000316448 SORL1Q92673 2214 aa11.75□□□□□ -0.53
CALR-201ENST00000316448 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 TRBV7-9A0A0J9YWB2 115 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 ID1P41134 155 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 GSN-AS1Q9NRJ2 163 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 ZNF324O75467 553 aaPredicted RBP11.74□□□□□ -0.53
CALR-201ENST00000316448 GPX1P07203 203 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 CD33P20138 364 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
CALR-201ENST00000316448 Q6ZWC4 215 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
CALR-201ENST00000316448 KIR3DS1Q14943 382 aa11.73□□□□□ -0.53
CALR-201ENST00000316448 NDUFA11Q86Y39 141 aa11.72□□□□□ -0.53
CALR-201ENST00000316448 DYNLRB2Q8TF09 96 aa11.72□□□□□ -0.53
CALR-201ENST00000316448 URB1-AS1Q96HZ7 61 aa11.72□□□□□ -0.53
CALR-201ENST00000316448 J3KRW8 73 aa11.71□□□□□ -0.53
CALR-201ENST00000316448 AMTP48728 403 aa11.71□□□□□ -0.53
CALR-201ENST00000316448 JMJD1CQ15652 2540 aa11.71□□□□□ -0.54
CALR-201ENST00000316448 NIPBLQ6KC79 2804 aaeCLIP11.7□□□□□ -0.542e-9■□□□□ 10.2
CALR-201ENST00000316448 A0A0J9YX75 114 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 PMCHP20382 165 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 NTF3P20783 257 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 ZNF124Q15973 351 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
CALR-201ENST00000316448 AGRNO00468 2067 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 MUC21A0A0G2JKD1 596 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 MUC21A0A140T8X8 626 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
CALR-201ENST00000316448 MUC21Q5SSG8 566 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 ZNF256Q9Y2P7 627 aaPredicted RBP11.69□□□□□ -0.54
CALR-201ENST00000316448 U3KQK5 164 aa11.69□□□□□ -0.54
CALR-201ENST00000316448 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
CALR-201ENST00000316448 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 OR5AL1P0C617 328 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 DEFB131AP59861 70 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 TWIST1Q15672 202 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 RNASEKQ6P5S7 137 aaKnown RBP11.68□□□□□ -0.54
CALR-201ENST00000316448 NIT1Q86X76 327 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 TMEM191AQ9H0A3 160 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 KNCNA6PVL3 124 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 KLLNB2CW77 178 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 SNAI2O43623 268 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 HSBP1O75506 76 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 IGKV3-20P01619 116 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 AMN1Q8IY45 258 aa11.68□□□□□ -0.54
CALR-201ENST00000316448 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
CALR-201ENST00000316448 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
CALR-201ENST00000316448 FAM19A2Q8N3H0 131 aa11.67□□□□□ -0.54
CALR-201ENST00000316448 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
CALR-201ENST00000316448 MSRB1Q9NZV6 116 aa11.67□□□□□ -0.54
CALR-201ENST00000316448 SSTP61278 116 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 D6R8Y8 96 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 RNASE4P34096 147 aaKnown RBP11.66□□□□□ -0.54
CALR-201ENST00000316448 LINC00482Q8N8I6 264 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 CITED1Q99966 193 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
CALR-201ENST00000316448 SAP30O75446 220 aa11.65□□□□□ -0.54
CALR-201ENST00000316448 SCGB1D1O95968 90 aa11.65□□□□□ -0.54
CALR-201ENST00000316448 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
CALR-201ENST00000316448 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
CALR-201ENST00000316448 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
CALR-201ENST00000316448 OR10AG1Q8NH19 301 aa11.65□□□□□ -0.54
CALR-201ENST00000316448 TENM1Q9UKZ4 2725 aa11.65□□□□□ -0.55
CALR-201ENST00000316448 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 LINC00614P0C842 121 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 KRTAP24-1Q3LI83 254 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 EBLN2Q6P2I7 272 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
CALR-201ENST00000316448 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
CALR-201ENST00000316448 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
CALR-201ENST00000316448 M0R2Z0 102 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 IGLV1-51P01701 117 aa11.64□□□□□ -0.55
CALR-201ENST00000316448 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
CALR-201ENST00000316448 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
CALR-201ENST00000316448 MED14OSP0DP75 135 aa11.63□□□□□ -0.55
CALR-201ENST00000316448 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
CALR-201ENST00000316448 PRIMA1Q86XR5 153 aa11.63□□□□□ -0.55
CALR-201ENST00000316448 Q8N976 141 aa11.63□□□□□ -0.55
CALR-201ENST00000316448 LINC00587B1AMM8 73 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 H3BMM0 161 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 H3BVH4 76 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 KRTDAPP60985 99 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 CACNG7P62955 275 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 ANXA2RQ3ZCQ2 193 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 PRELID3AQ96N28 172 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms