RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TRBV7-9A0A0J9YWB2 115 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 K7EQG2 157 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 PSMG4Q5JS54 123 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 KHDC1LQ5JSQ8 128 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 EBLN2Q6P2I7 272 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 TEX43Q6ZNM6 134 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 ORMDL3Q8N138 153 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 OR11H1Q8NG94 326 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 PRELID3AQ96N28 172 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 DUX3Q96PT4 197 aa13.77□□□□□ -0.21
CCDC43-201ENST00000315286 LINC01619G3V211 115 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 RNF185Q96GF1 192 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 SMKR1H3BMG3 65 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 RAB4AP20338 218 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 DMRTA1Q5VZB9 504 aa13.76□□□□□ -0.21
CCDC43-201ENST00000315286 OR5AL1P0C617 328 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 DDTP30046 118 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 CKS2P33552 79 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 OR1N2Q8NGR9 330 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 WFDC12Q8WWY7 111 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 AGRNO00468 2067 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 H3BVH4 76 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 SNAI2O43623 268 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
CCDC43-201ENST00000315286 ANXA2RQ3ZCQ2 193 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 PRSS3P2Q8NHM4 247 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 DPF1Q92782 380 aa13.75□□□□□ -0.21
CCDC43-201ENST00000315286 LOC389332A0A1B0GUA5 103 aa13.74□□□□□ -0.21
CCDC43-201ENST00000315286 NCR2O95944 276 aa13.74□□□□□ -0.21
CCDC43-201ENST00000315286 IFI27P40305 119 aaPredicted RBP13.74□□□□□ -0.21
CCDC43-201ENST00000315286 KLHL30-AS1Q8NEE0 82 aa13.74□□□□□ -0.21
CCDC43-201ENST00000315286 KLLNB2CW77 178 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 SIGLEC8Q9NYZ4 499 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 NPYP01303 97 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 EVI2AP22794 236 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
CCDC43-201ENST00000315286 TIMM8BQ9Y5J9 83 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-201ENST00000315286 IGHV4-4A0A075B6R2 117 aa13.72□□□□□ -0.21
CCDC43-201ENST00000315286 A0A0J9YX75 114 aa13.72□□□□□ -0.21
CCDC43-201ENST00000315286 GAS8-AS1O95177 125 aa13.72□□□□□ -0.21
CCDC43-201ENST00000315286 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
CCDC43-201ENST00000315286 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
CCDC43-201ENST00000315286 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
CCDC43-201ENST00000315286 LEPROTL1O95214 131 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-201ENST00000315286 KIR2DL5BA0A0G2JN68 375 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 KIR2DL5BA0A0G2JPC4 375 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 GNRH2O43555 120 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 SPRY2O43597 315 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 CACNG7P62955 275 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 KIR2DL5AQ8N109 375 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 PAM16Q9Y3D7 125 aa13.71□□□□□ -0.21
CCDC43-201ENST00000315286 SETD2Q9BYW2 2564 aaPredicted RBP13.71□□□□□ -0.22
CCDC43-201ENST00000315286 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 C11orf44Q8N8P7 122 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 VAMP8Q9BV40 100 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 PPBPP02775 128 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 S100A4P26447 101 aaKnown RBP13.7□□□□□ -0.22
CCDC43-201ENST00000315286 ASIPP42127 132 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 SMR3AQ99954 134 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
CCDC43-201ENST00000315286 DEFA6Q01524 100 aa13.69□□□□□ -0.22
CCDC43-201ENST00000315286 SPATA12Q7Z6I5 190 aa13.69□□□□□ -0.22
CCDC43-201ENST00000315286 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
CCDC43-201ENST00000315286 TCF21O43680 179 aa13.68□□□□□ -0.22
CCDC43-201ENST00000315286 RNASE1P07998 156 aaKnown RBP13.68□□□□□ -0.22
CCDC43-201ENST00000315286 SMIM15Q7Z3B0 74 aa13.68□□□□□ -0.22
CCDC43-201ENST00000315286 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
CCDC43-201ENST00000315286 TRAV12-3A0A0B4J271 114 aa13.68□□□□□ -0.22
CCDC43-201ENST00000315286 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-201ENST00000315286 ODF3Q96PU9 254 aa13.68□□□□□ -0.22
CCDC43-201ENST00000315286 WNK1Q9H4A3 2382 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 M0R381 172 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 CD28P10747 220 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 RNASE3P12724 160 aaKnown RBP13.67□□□□□ -0.22
CCDC43-201ENST00000315286 LEPP41159 167 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 C14orf144Q96I85 54 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 SCRT2Q9NQ03 307 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 TNFRSF6BO95407 300 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 ATOH7Q8N100 152 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 LINC01006Q8NI28 216 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
CCDC43-201ENST00000315286 TRAV12-2A0A075B6T6 113 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 A0A096LNJ9 63 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 A0A1W2PRX2 142 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 C7orf71A4D174 169 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 SYS1-DBNDD2H3BUS1 97 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 CRXO43186 299 aaPredicted RBP13.66□□□□□ -0.22
CCDC43-201ENST00000315286 MED14OSP0DP75 135 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 FAM159AQ6UWV7 190 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 MUC4Q99102 2169 aa13.66□□□□□ -0.22
CCDC43-201ENST00000315286 FOXI2Q6ZQN5 318 aa13.65□□□□□ -0.22
CCDC43-201ENST00000315286 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
CCDC43-201ENST00000315286 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms