RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 F8W735 103 aaPredicted RBP10.56□□□□□ -0.72
RFFL-201ENST00000315249 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
RFFL-201ENST00000315249 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
RFFL-201ENST00000315249 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
RFFL-201ENST00000315249 FNDC4Q9H6D8 234 aaPredicted RBP10.56□□□□□ -0.72
RFFL-201ENST00000315249 H3BMM0 161 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 C2orf70A6NJV1 201 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 RHOHQ15669 191 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 RNASE13Q5GAN3 156 aaKnown RBP10.55□□□□□ -0.72
RFFL-201ENST00000315249 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BKO60814 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BJP06899 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BOP23527 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BBP33778 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BDP58876 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BCP62807 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST2H2BEQ16778 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.55□□□□□ -0.72
RFFL-201ENST00000315249 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BHQ93079 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BNQ99877 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 HIST1H2BMQ99879 126 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 NXPH4O95158 308 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 MYCNOSP40205 109 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 SPRY2O43597 315 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 LRRC75A-AS1Q8N1F1 130 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
RFFL-201ENST00000315249 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 LY6G6DO95868 133 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 LYL1P12980 280 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 DSCAML1Q8TD84 2053 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 CRLF1O75462 422 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 XCL1P47992 114 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 PMVKQ15126 192 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
RFFL-201ENST00000315249 ZC2HC1AQ96GY0 325 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 FXYD5Q96DB9 178 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 KLK5Q9Y337 293 aaPredicted RBP10.53□□□□□ -0.72
RFFL-201ENST00000315249 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 GYPEP15421 78 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 ANAPC10Q9UM13 185 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 POU2AF1Q16633 256 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 A0A1B0GW64 132 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 PRSS29PA6NIE9 313 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 H3BUT2 72 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
RFFL-201ENST00000315249 CD5LO43866 347 aa10.52□□□□□ -0.72
RFFL-201ENST00000315249 SIRPDQ9H106 197 aa10.52□□□□□ -0.72
RFFL-201ENST00000315249 NAV2Q8IVL1 2488 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 IGLL5B9A064 214 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 UBE2BP63146 152 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 C10orf126Q8N4M7 172 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 hDV102S1A0JD36 115 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
RFFL-201ENST00000315249 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 C1orf43Q9BWL3 253 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
RFFL-201ENST00000315249 LMO4P61968 165 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 K7EIM0 57 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 MRPL51Q4U2R6 128 aaKnown RBP10.5□□□□□ -0.73
RFFL-201ENST00000315249 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 C22orf34Q6ZV56 151 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 ATP5G1P05496 136 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 Q8NFD4 153 aa10.5□□□□□ -0.73
RFFL-201ENST00000315249 RAI1Q7Z5J4 1906 aaPredicted RBP10.49□□□□□ -0.73
RFFL-201ENST00000315249 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
RFFL-201ENST00000315249 TEX48A0A1B0GUV7 120 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 GUSBP1Q15486 140 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 MRPL23Q16540 153 aaKnown RBP10.49□□□□□ -0.73
RFFL-201ENST00000315249 ZC2HC1BQ5TFG8 222 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 AGPAT4-IT1Q9H0P7 198 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 ESDP10768 282 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 IGHG2P01859 326 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 I3L2K1 104 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
RFFL-201ENST00000315249 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
RFFL-201ENST00000315249 HIST2H2BDQ6DRA6 164 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms