RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 LYZL1Q6UWQ5 148 aa2.53□□□□□ -2
CLOCK-201ENST00000309964 IGKV2-40A0A087WW87 121 aaPredicted RBP2.53□□□□□ -2.01
CLOCK-201ENST00000309964 IGKV2D-40P01614 121 aaPredicted RBP2.53□□□□□ -2.01
CLOCK-201ENST00000309964 PROK2Q9HC23 129 aa2.53□□□□□ -2.01
CLOCK-201ENST00000309964 SIGLEC8Q9NYZ4 499 aa2.53□□□□□ -2.01
CLOCK-201ENST00000309964 TRAV8-1A0A0A6YYK1 113 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 PRSS47A8MTI9 375 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 NDUFB1O75438 58 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 DEFB112Q30KQ8 113 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 FAM104BQ5XKR9 115 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 Q6ZSR3 168 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 C14orf178Q8N769 122 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-201ENST00000309964 H0YGX0 51 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 H3BTX0 84 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 BUB3O43684 328 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 IFITM1P13164 125 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 NTF4P34130 210 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 Q86TA4 180 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 MRPL36Q9P0J6 103 aaKnown RBP2.52□□□□□ -2.01
CLOCK-201ENST00000309964 C15orf65H3BRN8 121 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 IGLC1P0CG04 106 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 HLA-DRB4P13762 266 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 CRYBA4P53673 196 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 ZNF491Q8N8L2 437 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 C15orf53Q8NAA6 179 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 HLA-DRB4X5D2U9 266 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 SSBP2P81877 361 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-201ENST00000309964 SPRY4Q9C004 299 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 CRYGCP07315 174 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 C5orf56Q8N8D9 126 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 PIFOQ8TCI5 191 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 TRAV13-1A0A0B4J241 112 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 SERF1AO75920 110 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 TAL2Q16559 108 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 LGALS9BQ3B8N2 356 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 Q8N8P6 123 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 LINC00527Q9UJ94 153 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 USP24Q9UPU5 2620 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 CD5LO43866 347 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 ZNF503Q96F45 646 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 PRO0255Q9UI72 69 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 HHLA3Q9XRX5 114 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 IGKV3D-20A0A0C4DH25 116 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 LGALS9O00182 355 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 SIVA1O15304 175 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 ACYP1P07311 99 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 MIFP14174 115 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 ATP6V0E2Q8NHE4 81 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 ZNRF2Q8NHG8 242 aa2.52□□□□□ -2.01
CLOCK-201ENST00000309964 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 SELLP14151 372 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 UTF1Q5T230 341 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 Q6ZR03 302 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 ZNRD1Q9P1U0 126 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 DKK1O94907 266 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 FOXG1P55316 489 aaPredicted RBP2.51□□□□□ -2.01
CLOCK-201ENST00000309964 SLC25A29Q8N8R3 303 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 PRO1933Q9H354 126 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 A4D1N5 150 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 IGHG4P01861 327 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 IGF1P05019 195 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 SMIM2Q9BVW6 85 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 TNRC6BQ9UPQ9 1833 aaKnown RBP2.51□□□□□ -2.01
CLOCK-201ENST00000309964 IGLV11-55A0A075B6I3 123 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 SYS1-DBNDD2H3BUS1 97 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 LGALS9CQ6DKI2 356 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 SPATA25Q9BR10 227 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 PRR31Q5SQ13 230 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 PRO3102Q9H379 93 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 K7EP13 123 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 COX7A2LO14548 114 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 PRR30Q53SZ7 412 aaPredicted RBP2.51□□□□□ -2.01
CLOCK-201ENST00000309964 TRAV8-4A0A0B4J246 113 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 GNG5P63218 68 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 CFHR4Q92496 578 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 C11orf52Q96A22 123 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 LINC00574Q9H8X3 128 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 JMJD7-PLA2G4BH0Y9G9 81 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 HLA-DMBP28068 263 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 PIK3CD-AS1Q5SR53 167 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 C10orf55Q5SWW7 151 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 MBD6Q96DN6 1003 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 CLUHP3Q96NS8 147 aa2.51□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BKO60814 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV4-59P01825 116 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BJP06899 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BOP23527 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BBP33778 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BDP58876 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BCP62807 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 WT1-ASQ06250 92 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST2H2BEQ16778 126 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms