RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 IGHV4-39P01824 125 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 CR1LQ2VPA4 569 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 ZFP36P26651 326 aaKnown RBP9.92□□□□□ -0.82
RETREG3-201ENST00000309428 LGALS9BQ3B8N2 356 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 A0A0U1RRA0 63 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 ADORA2A-AS1P86434 159 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 KHDC1LQ5JSQ8 128 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
RETREG3-201ENST00000309428 BSNQ9UPA5 3926 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 COL27A1Q8IZC6 1860 aaPredicted RBP9.91□□□□□ -0.82
RETREG3-201ENST00000309428 C15orf32Q32M92 178 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 IL17RELQ6ZVW7 336 aa9.91□□□□□ -0.82
RETREG3-201ENST00000309428 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 METTL26Q96S19 204 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 ANAPC13Q9BS18 74 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 CELSR2Q9HCU4 2923 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 A0A1W2PPR1 153 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 PVRIGQ6DKI7 326 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 C2orf91Q6ZV80 131 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 PTH2Q96A98 100 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 PRR25Q96S07 402 aa9.9□□□□□ -0.82
RETREG3-201ENST00000309428 AGRNO00468 2067 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 TRAV2A0A0B4J234 112 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 G3V4G9 280 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 RNASE4P34096 147 aaKnown RBP9.9□□□□□ -0.83
RETREG3-201ENST00000309428 LAGE3Q14657 143 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 TTC32Q5I0X7 151 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.83
RETREG3-201ENST00000309428 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.83
RETREG3-201ENST00000309428 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 PF4V1P10720 104 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 HLA-DRB4P13762 266 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 HLA-DRB4X5D2U9 266 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 SAA4P35542 130 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 NBL1P41271 181 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 C5orf64Q2M2E5 130 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 TMEM30BQ3MIR4 351 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 ZNF491Q8N8L2 437 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 THAP8Q8NA92 274 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 DPF1Q92782 380 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 IGSF10Q6WRI0 2623 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 C19orf71A6NCJ1 209 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
RETREG3-201ENST00000309428 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
RETREG3-201ENST00000309428 DTX2Q86UW9 622 aa9.89□□□□□ -0.83
RETREG3-201ENST00000309428 GAS8-AS1O95177 125 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 IGLV1-47P01700 117 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 SLC25A16P16260 332 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 C12orf74Q32Q52 190 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 BOD1L2Q8IYS8 172 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 MLST8Q9BVC4 326 aa9.88□□□□□ -0.83
RETREG3-201ENST00000309428 PRB1P04280 392 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 ZNF56Q15929 161 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 SIGLEC15Q6ZMC9 328 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 HECTD1Q9ULT8 2610 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 KLHL30-AS1Q8NEE0 82 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 ATP6V0BQ99437 205 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 C19orf84I3L1E1 186 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 K7EIM0 57 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 ATP6V0E1O15342 81 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 CEND1Q8N111 149 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 C20orf78Q9BR46 151 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
RETREG3-201ENST00000309428 ATP5J2P56134 94 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 KLF12Q9Y4X4 402 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 TRGV3P03979 118 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 CLUHP3Q96NS8 147 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 A0A087WWL8 130 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 SNCGO76070 127 aa9.86□□□□□ -0.83
RETREG3-201ENST00000309428 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 FGF6P10767 208 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 TMEM95Q3KNT9 176 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 IGLL5B9A064 214 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
RETREG3-201ENST00000309428 CRIP1P50238 77 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 INSL3P51460 131 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 ZNF562Q6V9R5 426 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 A8MWV9 139 aa9.85□□□□□ -0.83
RETREG3-201ENST00000309428 C9JAW5 83 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 ZNF80P51504 273 aaPredicted RBP9.84□□□□□ -0.83
RETREG3-201ENST00000309428 CCDC144NLQ6NUI1 221 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 Q6ZQT7 251 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 C11orf44Q8N8P7 122 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 DLX4Q92988 240 aaPredicted RBP9.84□□□□□ -0.83
RETREG3-201ENST00000309428 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 MSRB2Q9Y3D2 182 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 TRBV20-1A0A075B6N2 111 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 DGAT2L7PQ6IED9 249 aa9.84□□□□□ -0.83
RETREG3-201ENST00000309428 H3BRN7 92 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms