RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CSN1S1P47710 185 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 TFPI2P48307 235 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 HINT1P49773 126 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-201ENST00000308987 DLX1P56177 255 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 GNG5P63218 68 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 SEC11AP67812 179 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 HIST1H1AQ02539 215 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-201ENST00000308987 PRB3Q04118 309 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-201ENST00000308987 C10orf55Q5SWW7 151 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 LCN12Q6JVE5 192 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 PRR27Q6MZM9 219 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 TCF24Q7RTU0 167 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 PPP1R27Q86WC6 154 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 BPIFA4PQ86YQ2 179 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 DEFB125Q8N687 156 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 NRACQ8N912 160 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 OR1N2Q8NGR9 330 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 GTSF1Q8WW33 167 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 PGLYRP4Q96LB8 373 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 SHANK2-AS3Q9BTD1 123 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 SLC25A39Q9BZJ4 359 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-201ENST00000308987 SCRT2Q9NQ03 307 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 MRPL36Q9P0J6 103 aaKnown RBP3.76□□□□□ -1.81
CKS1B-201ENST00000308987 CTSZQ9UBR2 303 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 TRBV19A0A075B6N1 114 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV1-3A0A0C4DH29 117 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 WI2-2373I1.2A0A1W2PRP0 233 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 H3BRN7 92 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 I3L2K1 104 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 TIMM23O14925 209 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 SIVA1O15304 175 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 COX8AP10176 69 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 PSG1P11464 419 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 HTR1DP28221 377 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 ODF1Q14990 250 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 PLGLAQ15195 96 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 UNQ5815/PRO19632Q6UWF5 114 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 LINC00322Q6ZN03 302 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-201ENST00000308987 TMEM86BQ8N661 226 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 PIFOQ8TCI5 191 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 BLNKQ8WV28 456 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 RASL11BQ9BPW5 248 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 SIRPDQ9H106 197 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 ZNRD1Q9P1U0 126 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 U3KQK5 164 aa3.75□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV1-69DA0A0B4J2H0 117 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 SH2D7A6NKC9 451 aaPredicted RBP3.74□□□□□ -1.81
CKS1B-201ENST00000308987 LY6LH3BQJ8 138 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 BUB1B-PAK6H3BSN5 160 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 TAX1BP3O14907 124 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 MRPS12O15235 138 aaKnown RBP3.74□□□□□ -1.81
CKS1B-201ENST00000308987 ENSAO43768 121 aaKnown RBP3.74□□□□□ -1.81
CKS1B-201ENST00000308987 SCGB2A1O75556 95 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 IGKV1-17P01599 117 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV1-69P01742 117 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 CT45A10P0DMU9 189 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 CEACAM3P40198 252 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 LYZP61626 148 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 RBX1P62877 108 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 PSG9Q00887 426 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 DIAPH2-AS1Q14236 149 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 PSG3Q16557 428 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 LGALS9BQ3B8N2 356 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 MAJINQ3KP22 176 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 MPV17L2Q567V2 206 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 BVES-AS1Q5T3Y7 98 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 LGALS9CQ6DKI2 356 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 HCP5Q6MZN7 132 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 SIGLEC15Q6ZMC9 328 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 GOLT1AQ6ZVE7 132 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 FA2HQ7L5A8 372 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 ATOH7Q8N100 152 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 NPBQ8NG41 125 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 OR4C5Q8NGB2 326 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 OR9G4Q8NGQ1 327 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 SRSF12Q8WXF0 261 aaKnown RBP3.74□□□□□ -1.81
CKS1B-201ENST00000308987 C16orf95Q9H693 158 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 CLEC5AQ9NY25 188 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 PSG8Q9UQ74 426 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
CKS1B-201ENST00000308987 LINC01546A6NGU7 62 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 NPIPB5A8MRT5 1133 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 OOSP1A8MZH6 123 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 K7EIM0 57 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 NDUFA3O95167 84 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 PPBPP02775 128 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 ARMS2P0C7Q2 107 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 MALP21145 153 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 FCGR2BP31994 310 aaPredicted RBP3.73□□□□□ -1.81
CKS1B-201ENST00000308987 GPR183P32249 361 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 BMI1P35226 326 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 PCP4P48539 62 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 RAB9AP51151 201 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 ARF6P62330 175 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 KLRD1Q13241 179 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 VAMP3Q15836 100 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 KLK9Q2XQG4 91 aa3.73□□□□□ -1.81
CKS1B-201ENST00000308987 FAM104BQ5XKR9 115 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms