RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 HIST1H2BHQ93079 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BNQ99877 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BMQ99879 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 SRD5A3Q9H8P0 318 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 PRKDCP78527 4128 aaKnown RBP5.15□□□□□ -1.59
PTCD2-201ENST00000308077 IGKV3D-20A0A0C4DH25 116 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 TMEM189A5PLL7 270 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1BA6NDE4 496 aaKnown RBP5.15□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1EA6NEQ0 496 aaKnown RBP5.15□□□□□ -1.59
PTCD2-201ENST00000308077 C5orf52A6NGY3 159 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1DP0C7P1 496 aaKnown RBP5.15□□□□□ -1.59
PTCD2-201ENST00000308077 HLA-DRB4P13762 266 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 ACTL10Q5JWF8 245 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 GFI1BQ5VTD9 330 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 OR2K2Q8NGT1 345 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 BTF3L4Q96K17 158 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 ODF3Q96PU9 254 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 ZNF747Q9BV97 191 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 GFRA4Q9GZZ7 299 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 NAT8BQ9UHF3 227 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 HLA-DRB4X5D2U9 266 aa5.15□□□□□ -1.59
PTCD2-201ENST00000308077 H3BMM0 161 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 M0R2Z0 102 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 DUSP14O95147 198 aaKnown RBP5.14□□□□□ -1.59
PTCD2-201ENST00000308077 ORM1P02763 201 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 GPX1P07203 203 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 RNASE4P34096 147 aaKnown RBP5.14□□□□□ -1.59
PTCD2-201ENST00000308077 FOXA3P55318 350 aaPredicted RBP5.14□□□□□ -1.59
PTCD2-201ENST00000308077 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 Q6AWC8 147 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 MRPL54Q6P161 138 aaKnown RBP5.14□□□□□ -1.59
PTCD2-201ENST00000308077 PGLYRP4Q96LB8 373 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 TRAV12-2A0A075B6T6 113 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 GRIFINA4D1Z8 144 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 CD7P09564 240 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 NDUFA6P56556 154 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 FABP9Q0Z7S8 132 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 SPINK13Q1W4C9 94 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 BEAN1Q3B7T3 259 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 C19orf73Q9NVV2 129 aa5.14□□□□□ -1.59
PTCD2-201ENST00000308077 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 A0A1B0GXF2 115 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 IGLC6P0CF74 106 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 LEPP41159 167 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 FXYD7P58549 80 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
PTCD2-201ENST00000308077 TRAV12-3A0A0B4J271 114 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 C7orf71A4D174 169 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 OR11H12B2RN74 326 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 ZNF324O75467 553 aaPredicted RBP5.12□□□□□ -1.59
PTCD2-201ENST00000308077 ARMS2P0C7Q2 107 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 CDKN1BP46527 198 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 RPS20P60866 119 aaKnown RBP5.12□□□□□ -1.59
PTCD2-201ENST00000308077 ANXA2RQ3ZCQ2 193 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 MUC21Q5SSG8 566 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 C9orf66Q5T8R8 295 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 LYZL1Q6UWQ5 148 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 MUC21A0A0G2JKD1 596 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 MUC21A0A140T8X8 626 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 XKRY2A2RUG3 117 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 SNURFLB1AK76 121 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 UBE2CO00762 179 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 CRXO43186 299 aaPredicted RBP5.12□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1A1P0DJD3 496 aaKnown RBP5.12□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1CP0DJD4 496 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 CTRLP40313 264 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 INSL3P51460 131 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
PTCD2-201ENST00000308077 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 C3orf56Q8N813 242 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 WFDC9Q8NEX5 89 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 TPPP3Q9BW30 176 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 NAGKQ9UJ70 344 aa5.12□□□□□ -1.59
PTCD2-201ENST00000308077 IGLL1P15814 213 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 TSPOP30536 169 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 HBBP68871 147 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 C12orf54Q6X4T0 127 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 TRPT1Q86TN4 253 aaKnown RBP5.11□□□□□ -1.59
PTCD2-201ENST00000308077 FER1L6-AS1Q8NA97 138 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 FAM110AQ9BQ89 295 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 GNB1LQ9BYB4 327 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 TRAPPC1Q9Y5R8 145 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 CMYA5Q8N3K9 4069 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 A0A1B0GUT8 65 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 GNRH2O43555 120 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 HOXA5P20719 270 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 CAMPP49913 170 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 KIAA1644Q3SXP7 199 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 PDZD11Q5EBL8 140 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 RASL11AQ6T310 242 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 SHISA2Q6UWI4 295 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 CLUHP3Q96NS8 147 aa5.11□□□□□ -1.59
PTCD2-201ENST00000308077 SSBP4Q9BWG4 385 aaPredicted RBP5.11□□□□□ -1.59
PTCD2-201ENST00000308077 MRPL18Q9H0U6 180 aaKnown RBP5.11□□□□□ -1.59
PTCD2-201ENST00000308077 F2Z2F3 143 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms