RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PTH2Q96A98 100 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 A0A096LNJ9 63 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 K7EP34 96 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 AZU1P20160 251 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
PTPN9-201ENST00000306726 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 IGHV3-73A0A0B4J1V6 119 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 PRSS2P07478 247 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 COX6B1P14854 86 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 CT83Q5H943 113 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 INSL3P51460 131 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
PTPN9-201ENST00000306726 H3BRM9 83 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 CRYGCP07315 174 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 IGLV1-47P01700 117 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 DUX5Q96PT3 197 aa11.3□□□□□ -0.6
PTPN9-201ENST00000306726 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 FGF6P10767 208 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 OR4X2Q8NGF9 303 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 METTL26Q96S19 204 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
PTPN9-201ENST00000306726 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 KHDC1LQ5JSQ8 128 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 HIST2H2BDQ6DRA6 164 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 J3QR89 54 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 CDSNQ15517 529 aa11.29□□□□□ -0.6
PTPN9-201ENST00000306726 ADARB2-AS1A8MUL3 147 aa11.28□□□□□ -0.6
PTPN9-201ENST00000306726 GNRH2O43555 120 aa11.28□□□□□ -0.6
PTPN9-201ENST00000306726 CTSGP08311 255 aa11.28□□□□□ -0.6
PTPN9-201ENST00000306726 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
PTPN9-201ENST00000306726 JPT2Q9H910 190 aa11.28□□□□□ -0.6
PTPN9-201ENST00000306726 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.6
PTPN9-201ENST00000306726 LGALS9CQ6DKI2 356 aa11.27□□□□□ -0.6
PTPN9-201ENST00000306726 CLEC2AQ6UVW9 174 aa11.27□□□□□ -0.6
PTPN9-201ENST00000306726 ITPR1Q14643 2758 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 KMT2BQ9UMN6 2715 aaPredicted RBP11.27□□□□□ -0.61
PTPN9-201ENST00000306726 SLC25A16P16260 332 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
PTPN9-201ENST00000306726 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
PTPN9-201ENST00000306726 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
PTPN9-201ENST00000306726 Q6AWC8 147 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 LAGE3Q14657 143 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 GAGE13Q4V321 117 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 PRTN3P24158 256 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
PTPN9-201ENST00000306726 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
PTPN9-201ENST00000306726 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
PTPN9-201ENST00000306726 ODF1Q14990 250 aa11.25□□□□□ -0.61
PTPN9-201ENST00000306726 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
PTPN9-201ENST00000306726 SAA4P35542 130 aa11.25□□□□□ -0.61
PTPN9-201ENST00000306726 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
PTPN9-201ENST00000306726 CIDEAO60543 219 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
PTPN9-201ENST00000306726 TRBV12-3P01733 135 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 IGSF10Q6WRI0 2623 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 ZFP36P26651 326 aaKnown RBP11.24□□□□□ -0.61
PTPN9-201ENST00000306726 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
PTPN9-201ENST00000306726 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 ZNF56Q15929 161 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 ZNF562Q6V9R5 426 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
PTPN9-201ENST00000306726 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 OR10J6PQ8NGY7 276 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 C20orf78Q9BR46 151 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 NCOR1P1Q9H4R4 102 aa11.23□□□□□ -0.61
PTPN9-201ENST00000306726 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 CD7P09564 240 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
PTPN9-201ENST00000306726 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
PTPN9-201ENST00000306726 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 TRAV2A0A0B4J234 112 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 HOXB4P17483 251 aaPredicted RBP11.22□□□□□ -0.61
PTPN9-201ENST00000306726 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
PTPN9-201ENST00000306726 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPN9-201ENST00000306726 BPESC1Q9GZL8 116 aa11.22□□□□□ -0.61
PTPN9-201ENST00000306726 A0A1B0GW15 77 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 ATP5LO75964 103 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 ZNF688P0C7X2 276 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 IGHV3OR16-12A0A075B7B8 117 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms