RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CD7P09564 240 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 IGLC6P0CF74 106 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 RAB4BP61018 213 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 HBBP68871 147 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 RIGQ13278 110 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 GFI1BQ5VTD9 330 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 LYZL1Q6UWQ5 148 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 FRZBQ92765 325 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 TRAV12-2A0A075B6T6 113 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 A0A1B0GW15 77 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 A0A1B0GXF2 115 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 F2Z2F3 143 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 FRMD6-AS1P0C7T7 363 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
KRT28-201ENST00000306658 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
KRT28-201ENST00000306658 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 S100A8P05109 93 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 CAMPP49913 170 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 TMEM136Q6ZRR5 245 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 RBMY1BA6NDE4 496 aaKnown RBP12.93□□□□□ -0.34
KRT28-201ENST00000306658 RBMY1EA6NEQ0 496 aaKnown RBP12.93□□□□□ -0.34
KRT28-201ENST00000306658 RBMY1DP0C7P1 496 aaKnown RBP12.93□□□□□ -0.34
KRT28-201ENST00000306658 ARMS2P0C7Q2 107 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 CTRLP40313 264 aa12.93□□□□□ -0.34
KRT28-201ENST00000306658 MRPL18Q9H0U6 180 aaKnown RBP12.93□□□□□ -0.34
KRT28-201ENST00000306658 PHOX2AO14813 284 aa12.92□□□□□ -0.34
KRT28-201ENST00000306658 FXYD7P58549 80 aa12.92□□□□□ -0.34
KRT28-201ENST00000306658 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
KRT28-201ENST00000306658 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
KRT28-201ENST00000306658 GTSCR1Q86UQ5 136 aa12.92□□□□□ -0.34
KRT28-201ENST00000306658 C19orf73Q9NVV2 129 aa12.92□□□□□ -0.34
KRT28-201ENST00000306658 AMBPP02760 352 aa12.91□□□□□ -0.34
KRT28-201ENST00000306658 ASIPP42127 132 aa12.91□□□□□ -0.34
KRT28-201ENST00000306658 STAB1Q9NY15 2570 aa12.91□□□□□ -0.34
KRT28-201ENST00000306658 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
KRT28-201ENST00000306658 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
KRT28-201ENST00000306658 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
KRT28-201ENST00000306658 SSBP4Q9BWG4 385 aaPredicted RBP12.9□□□□□ -0.34
KRT28-201ENST00000306658 COL6A5A8TX70 2615 aa12.9□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 TRGC1P0CF51 173 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 IGLL1P15814 213 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
KRT28-201ENST00000306658 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 CNFNQ9BYD5 112 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 WIPF1O43516 503 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 APCSP02743 223 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 S100A6P06703 90 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
KRT28-201ENST00000306658 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 GNRH2O43555 120 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 SNAI2O43623 268 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 NTF3P20783 257 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 SSTP61278 116 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 TWIST1Q15672 202 aa12.88□□□□□ -0.35
KRT28-201ENST00000306658 MUC21A0A0G2JKD1 596 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 MUC21A0A140T8X8 626 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 H3BVH4 76 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 INSP01308 110 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 CACNG7P62955 275 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 WFDC10AQ9H1F0 79 aa12.87□□□□□ -0.35
KRT28-201ENST00000306658 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
KRT28-201ENST00000306658 SLAQ13239 276 aa12.86□□□□□ -0.35
KRT28-201ENST00000306658 SPANXN1Q5VSR9 72 aa12.86□□□□□ -0.35
KRT28-201ENST00000306658 ZNF493Q6ZR52 646 aa12.86□□□□□ -0.35
KRT28-201ENST00000306658 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
KRT28-201ENST00000306658 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
KRT28-201ENST00000306658 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
KRT28-201ENST00000306658 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
KRT28-201ENST00000306658 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
KRT28-201ENST00000306658 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
KRT28-201ENST00000306658 TRGV11A0A075B6L2 103 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
KRT28-201ENST00000306658 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
KRT28-201ENST00000306658 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
KRT28-201ENST00000306658 Q8N1Y9 231 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 SCRT2Q9NQ03 307 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
KRT28-201ENST00000306658 CBY3A6NI87 242 aa12.83□□□□□ -0.35
KRT28-201ENST00000306658 NDUFA6P56556 154 aa12.83□□□□□ -0.35
KRT28-201ENST00000306658 PRR31Q5SQ13 230 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms