RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 TMEM75Q8N9X5 138 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 TMEM242Q9NWH2 141 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 F8P00451 2351 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 SHISA3A0PJX4 238 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 ATP6V0E1O15342 81 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 CCL24O00175 119 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 GUSBP1Q15486 140 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 BUB3O43684 328 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 C17orf58Q2M2W7 97 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 Q9HAA7 133 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 TP53TG1Q9Y2A0 90 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 C9JAW5 83 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 LY6HO94772 140 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 Q6ZSR3 168 aa6.63□□□□□ -1.35
PCDHB1-201ENST00000306549 NXPH4O95158 308 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 HLA-DRB4P13762 266 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 HLA-DRB4X5D2U9 266 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 ACANP16112 2415 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 A0A1W2PPI3 338 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 TFF1P04155 84 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 KNCNA6PVL3 124 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 LHFPL4Q7Z7J7 247 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 NPBQ8NG41 125 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 MRPL23Q16540 153 aaKnown RBP6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 AGMATQ9BSE5 352 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 A0A1B0GW64 132 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 C15orf53Q8NAA6 179 aa6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 MRPL36Q9P0J6 103 aaKnown RBP6.62□□□□□ -1.35
PCDHB1-201ENST00000306549 MAPK1IP1LQ8NDC0 245 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 AJUBAQ96IF1 538 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 UBE2AP49459 152 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 RPP25LQ8N5L8 163 aaKnown RBP6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 NUP35Q8NFH5 326 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 TMEM14CQ9P0S9 112 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 C5orf63A6NC05 138 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 C15orf65H3BRN8 121 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 IGKV1-16P04430 117 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 MRPL53Q96EL3 112 aaKnown RBP6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 LINC00473A8K010 186 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 A0A1W2PNU3 283 aaPredicted RBP6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 ZNF124Q15973 351 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 GFI1Q99684 422 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 CITED1Q99966 193 aa6.61□□□□□ -1.35
PCDHB1-201ENST00000306549 SPANXCQ9NY87 97 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 FAM231BA6NCW3 169 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 ZNF134P52741 427 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 Q86TA4 180 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 TIMM17AQ99595 171 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 GOLGB1Q14789 3259 aaKnown RBP6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 IGHV4-30-2A0A087WSY4 118 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
PCDHB1-201ENST00000306549 MP68P56378 58 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 CENPVL3A0A0U1RRI6 287 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 PRB1P04280 392 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 GSN-AS1Q9NRJ2 163 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 SDHAF1A6NFY7 115 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 C10orf142B7Z368 130 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 MYCNOSP40205 109 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 RNF126Q9BV68 326 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 AMN1Q8IY45 258 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 DEFB105AQ8NG35 78 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 PRSS46E5RG02 174 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 IGKV1-39P01597 117 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 HS3ST6Q96QI5 342 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 KLHDC3Q9BQ90 382 aa6.59□□□□□ -1.35
PCDHB1-201ENST00000306549 SYS1-DBNDD2H3BUS1 97 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 LYL1P12980 280 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 LINC01551Q86U37 167 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 CFHR4Q92496 578 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 PIFOQ8TCI5 191 aa6.59□□□□□ -1.36
PCDHB1-201ENST00000306549 DEFB112Q30KQ8 113 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 GP9P14770 177 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 Q8N8P6 123 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 A0A096LPF7 62 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 CRYGCP07315 174 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms