RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 IGHV4-39P01824 125 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 IGLV2-18A0A075B6J9 118 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 TRAV40A0A0B4J280 105 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 IGHV3-11P01762 117 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 TM4SF20Q53R12 229 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
CSDC2-201ENST00000306149 MRPL53Q96EL3 112 aaKnown RBP11.55□□□□□ -0.56
CSDC2-201ENST00000306149 IGKV2D-26A0A0A0MRZ7 120 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 H3BVH4 76 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 GNLYP22749 145 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 SMPXQ9UHP9 88 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 U3KQE9 123 aa11.54□□□□□ -0.56
CSDC2-201ENST00000306149 ATP5LO75964 103 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 IGKCP01834 107 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 ARL3P36405 182 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 OR2K2Q8NGT1 345 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 FOXC2Q99958 501 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 CENPEQ02224 2701 aa11.53□□□□□ -0.56
CSDC2-201ENST00000306149 A0A1W2PPM0 123 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 CIDEAO60543 219 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 RAB37Q96AX2 223 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.56
CSDC2-201ENST00000306149 DOPEY2Q9Y3R5 2298 aa11.52□□□□□ -0.57
CSDC2-201ENST00000306149 IGHV4-61A0A0C4DH41 118 aa11.52□□□□□ -0.57
CSDC2-201ENST00000306149 RIPPLY3P57055 190 aa11.52□□□□□ -0.57
CSDC2-201ENST00000306149 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
CSDC2-201ENST00000306149 USP9YO00507 2555 aaPredicted RBP11.52□□□□□ -0.57
CSDC2-201ENST00000306149 DPM2O94777 84 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 KLK15Q9H2R5 256 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
CSDC2-201ENST00000306149 F6UB75 175 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 Q6ZS46 218 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 NRACQ8N912 160 aa11.51□□□□□ -0.57
CSDC2-201ENST00000306149 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 M0R381 172 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 BLCAPP62952 87 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
CSDC2-201ENST00000306149 SMIM13P0DJ93 91 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 SRD5A1P18405 259 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 SPCS1Q9Y6A9 102 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 TMEM8BA6NDV4 472 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 SAP30O75446 220 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 LAGE3Q14657 143 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 MYO18BQ8IUG5 2567 aa11.49□□□□□ -0.57
CSDC2-201ENST00000306149 SORL1Q92673 2214 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 POLQO75417 2590 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 H3BUX3 64 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 GCSHP23434 173 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 FXYD2P54710 66 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 PF4V1P10720 104 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 FABP2P12104 132 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 NEGR1Q7Z3B1 354 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
CSDC2-201ENST00000306149 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
CSDC2-201ENST00000306149 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 K7EMI3 77 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 EDN2P20800 178 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 C9orf139Q6ZV77 190 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
CSDC2-201ENST00000306149 SAMD5Q5TGI4 173 aa11.46□□□□□ -0.57
CSDC2-201ENST00000306149 MYOZ3Q8TDC0 251 aa11.46□□□□□ -0.57
CSDC2-201ENST00000306149 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.57
CSDC2-201ENST00000306149 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
CSDC2-201ENST00000306149 S100A4P26447 101 aaKnown RBP11.46□□□□□ -0.58
CSDC2-201ENST00000306149 RNASE4P34096 147 aaKnown RBP11.46□□□□□ -0.58
CSDC2-201ENST00000306149 SRSF1Q07955 248 aaKnown RBP eCLIP11.46□□□□□ -0.58
CSDC2-201ENST00000306149 C14orf178Q8N769 122 aaPredicted RBP11.46□□□□□ -0.58
CSDC2-201ENST00000306149 DEFB104AQ8WTQ1 72 aa11.46□□□□□ -0.58
CSDC2-201ENST00000306149 MRAP2Q96G30 205 aa11.46□□□□□ -0.58
CSDC2-201ENST00000306149 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
CSDC2-201ENST00000306149 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.58
CSDC2-201ENST00000306149 A0A087WX48 190 aa11.45□□□□□ -0.58
CSDC2-201ENST00000306149 G3V4G9 280 aa11.45□□□□□ -0.58
CSDC2-201ENST00000306149 GNRH2O43555 120 aa11.45□□□□□ -0.58
CSDC2-201ENST00000306149 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms