RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MUC21Q5SSG8 566 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 RASL11AQ6T310 242 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 STHQ8IWL8 128 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 CAMPP49913 170 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 HBBP68871 147 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 MCRIP2Q9BUT9 160 aaKnown RBP9.59□□□□□ -0.87
CCDC7-202ENST00000302316 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 MT-ND6P03923 174 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 ANXA2RQ3ZCQ2 193 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
CCDC7-202ENST00000302316 PHOX2AO14813 284 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 CTRLP40313 264 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 MRPL18Q9H0U6 180 aaKnown RBP9.58□□□□□ -0.88
CCDC7-202ENST00000302316 HLA-DQA1P01909 254 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 RIGQ13278 110 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
CCDC7-202ENST00000302316 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 ZNF324O75467 553 aaPredicted RBP9.57□□□□□ -0.88
CCDC7-202ENST00000302316 TRGC1P0CF51 173 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 SSTP61278 116 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 C19orf73Q9NVV2 129 aa9.57□□□□□ -0.88
CCDC7-202ENST00000302316 H3BVH4 76 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 CRXO43186 299 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 IGLL1P15814 213 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 ASIPP42127 132 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-202ENST00000302316 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 A0A1B0GW15 77 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 F2Z2F3 143 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
CCDC7-202ENST00000302316 GTSCR1Q86UQ5 136 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
CCDC7-202ENST00000302316 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-202ENST00000302316 S100A8P05109 93 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 TIMM8BQ9Y5J9 83 aaPredicted RBP9.55□□□□□ -0.88
CCDC7-202ENST00000302316 GNRH2O43555 120 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 APCSP02743 223 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 S100A6P06703 90 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
CCDC7-202ENST00000302316 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 SLAQ13239 276 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
CCDC7-202ENST00000302316 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
CCDC7-202ENST00000302316 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 SNAI2O43623 268 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 INSP01308 110 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 OR5AL1P0C617 328 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 NTF3P20783 257 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
CCDC7-202ENST00000302316 TWIST1Q15672 202 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 TDRG1Q3Y452 100 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 CNFNQ9BYD5 112 aa9.54□□□□□ -0.88
CCDC7-202ENST00000302316 AMBPP02760 352 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 SPANXN1Q5VSR9 72 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 DEFB125Q8N687 156 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
CCDC7-202ENST00000302316 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 RNASE3P12724 160 aaKnown RBP9.52□□□□□ -0.89
CCDC7-202ENST00000302316 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
CCDC7-202ENST00000302316 DNLZQ5SXM8 178 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 GATD1Q8NB37 220 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 TP53TG3Q9ULZ0 132 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 TRRAPQ9Y4A5 3859 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 NDUFA6P56556 154 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 CACNG7P62955 275 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 Q8N1Y9 231 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 C20orf144Q9BQM9 153 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
CCDC7-202ENST00000302316 CBY3A6NI87 242 aa9.51□□□□□ -0.89
CCDC7-202ENST00000302316 WIPF1O43516 503 aa9.51□□□□□ -0.89
CCDC7-202ENST00000302316 HTN1P15515 57 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms