RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LTAP01374 205 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 NHLRC4P0CG21 123 aaPredicted RBP4.23□□□□□ -1.73
SSX3-201ENST00000298396 AZU1P20160 251 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
SSX3-201ENST00000298396 CRIP1P50238 77 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 PPT1P50897 306 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 NUTF2P61970 127 aaKnown RBP4.23□□□□□ -1.73
SSX3-201ENST00000298396 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
SSX3-201ENST00000298396 TMEM183BQ1AE95 376 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 Q6AWC8 147 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 PRNTQ86SH4 94 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 HIST1H2BAQ96A08 127 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 ZC2HC1AQ96GY0 325 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 FAM210AQ96ND0 272 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 TCEAL7Q9BRU2 100 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 VAX2Q9UIW0 290 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 CELA1Q9UNI1 258 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 LENEPQ9Y5L5 61 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 U3KQK5 164 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 A0A0J9YWU9 116 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 RAB19A4D1S5 217 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 PGPEP1LA6NFU8 196 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 AMBPP02760 352 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 GPX1P07203 203 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 SRP19P09132 144 aaKnown RBP4.22□□□□□ -1.73
SSX3-201ENST00000298396 TSPOP30536 169 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 AKR1C3P42330 323 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
SSX3-201ENST00000298396 CLLU1Q5K131 121 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 ZNF767PQ75MW2 155 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 COX8CQ7Z4L0 72 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 NHLRC2Q8NBF2 726 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 C11orf72Q8NBR9 251 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 FMC1Q96HJ9 113 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 TXNDC17Q9BRA2 123 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 MLST8Q9BVC4 326 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 C1QTNF4Q9BXJ3 329 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
SSX3-201ENST00000298396 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 TP53TG3Q9ULZ0 132 aa4.22□□□□□ -1.73
SSX3-201ENST00000298396 K7EN84 100 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 PDE6DO43924 150 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 GCGP01275 180 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 IFNA1P01562 189 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 CENPWQ5EE01 88 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 TMEM256Q8N2U0 113 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 RNASE8Q8TDE3 154 aaKnown RBP4.21□□□□□ -1.74
SSX3-201ENST00000298396 C20orf144Q9BQM9 153 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 GOLT1BQ9Y3E0 138 aa4.21□□□□□ -1.74
SSX3-201ENST00000298396 IGHV1OR15-1A0A075B7D0 117 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 IGKV3D-20A0A0C4DH25 116 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 FBLL1A6NHQ2 334 aaKnown RBP4.2□□□□□ -1.74
SSX3-201ENST00000298396 TMEM250H0YL14 139 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 H7BYZ3 331 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 K7EQM0 130 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 SH2D1AO60880 128 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 NDUFS6O75380 124 aaKnown RBP4.2□□□□□ -1.74
SSX3-201ENST00000298396 MIFP14174 115 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 TAS2R60P59551 318 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 ZNF674Q2M3X9 581 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 ANXA2RQ3ZCQ2 193 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 SMUG1Q53HV7 270 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 MUC21Q5SSG8 566 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 TMEM183AQ8IXX5 376 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 LINC00476Q8WZB0 136 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 LINC01587Q99440 93 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 PARLQ9H300 379 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 MED9Q9NWA0 146 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 ZFP30Q9Y2G7 519 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 HYDINQ4G0P3 5121 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
SSX3-201ENST00000298396 IGHV3-16A0A0C4DH30 117 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 SMIM9A6NGZ8 99 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 GNRH2O43555 120 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 TYMSP04818 313 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 S100A9P06702 114 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 HTN1P15515 57 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 TAGLN2P37802 199 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 NANOS2P60321 138 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 UBE2G1P62253 170 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 OR5I1Q13606 314 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 RRN3P1Q2M238 152 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 TDRG1Q3Y452 100 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 SAPCD1Q5SSQ6 148 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 BAGE2Q86Y30 109 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 EIF4E3Q8N5X7 224 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 OCC1Q8TAD7 63 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 TMEM263Q8WUH6 116 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 PYGO2Q9BRQ0 406 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 NIPSNAP3BQ9BS92 247 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms