RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 DLX6P56179 175 aa8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 TMEM30BQ3MIR4 351 aa8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 TEX36Q5VZQ5 186 aa8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 FAM215AQ9Y5M1 114 aa8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
ARHGEF3-201ENST00000296315 A0A087WX48 190 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 TMEM238LA0A1B0GVL6 79 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 A6NJY4 79 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 A8MWV9 139 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 LGALS1P09382 135 aaKnown RBP8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 ZFAND6Q6FIF0 208 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 CDIP1Q9H305 208 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 LINC00527Q9UJ94 153 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 H7C1H1 209 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 LYPD1Q8N2G4 141 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 CSPG4Q6UVK1 2322 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 NPC2P61916 151 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 C11orf21Q9P2W6 132 aa8.02□□□□□ -1.13
ARHGEF3-201ENST00000296315 F8VRH5 84 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 NBR2O15453 112 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TSPAN13O95857 204 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TTC32Q5I0X7 151 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TRPT1Q86TN4 253 aaKnown RBP8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TCL1BO95988 128 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 PLNP26678 52 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 ANKRD29Q8N6D5 301 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 RNASE6Q93091 150 aaKnown RBP8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TRAV2A0A0B4J234 112 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 IGF1P05019 195 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 TCTEX1D4Q5JR98 221 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 CLEC19AQ6UXS0 136 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 LINC00574Q9H8X3 128 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
ARHGEF3-201ENST00000296315 PRSS2P07478 247 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 PAX8Q06710 450 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 RAB1BQ9H0U4 201 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 PHLDA3Q9Y5J5 127 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 SNCGO76070 127 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 HOXB4P17483 251 aaPredicted RBP8□□□□□ -1.13
ARHGEF3-201ENST00000296315 FAM74A4Q5TZK3 123 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 AGPAT4-IT1Q9H0P7 198 aa8□□□□□ -1.13
ARHGEF3-201ENST00000296315 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 PPDPFLQ8WWR9 84 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 MBD3L4A6NDZ8 208 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 MBD3L3A6NE82 208 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 MBD3L5A6NJ08 208 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 ADARB2-AS1A8MUL3 147 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 MBD3L2Q8NHZ7 208 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 C16orf92Q96LL3 132 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
ARHGEF3-201ENST00000296315 CEACAM4O75871 244 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 PDE6HQ13956 83 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 LINC00311Q8N616 119 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 SMAD5-AS1Q9Y6J3 95 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 DUSP14O95147 198 aaKnown RBP7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 C15orf32Q32M92 178 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 Q6ZS46 218 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 ASCL5Q7RTU5 278 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 NTN5Q8WTR8 489 aaPredicted RBP7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 ZNF256Q9Y2P7 627 aaPredicted RBP7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 ZNF292O60281 2723 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 MRPS12O15235 138 aaKnown RBP7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 SRD5A1P18405 259 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 CRIP2P52943 208 aaPredicted RBP7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 ZMAT4Q9H898 229 aa7.98□□□□□ -1.13
ARHGEF3-201ENST00000296315 ZNF688P0C7X2 276 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 HERV-K104P63124 156 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 OR11H6Q8NGC7 330 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 LINC01560Q8TB33 94 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 IGKV3-20P01619 116 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 GAGE5Q13069 117 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 GAGE6Q13070 117 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 GATD1Q8NB37 220 aa7.97□□□□□ -1.13
ARHGEF3-201ENST00000296315 A0A087WWL8 130 aa7.96□□□□□ -1.13
ARHGEF3-201ENST00000296315 IGLV1-47P01700 117 aa7.96□□□□□ -1.13
ARHGEF3-201ENST00000296315 CRYGBP07316 175 aa7.96□□□□□ -1.13
ARHGEF3-201ENST00000296315 C5orf64Q2M2E5 130 aa7.96□□□□□ -1.13
ARHGEF3-201ENST00000296315 SLC25A20O43772 301 aa7.96□□□□□ -1.14
ARHGEF3-201ENST00000296315 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.14
ARHGEF3-201ENST00000296315 HERVK_113P61574 105 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms