RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 C9orf139Q6ZV77 190 aa12.66□□□□□ -0.38
RPN1-201ENST00000296255 ATP6V0BQ99437 205 aa12.66□□□□□ -0.38
RPN1-201ENST00000296255 MRPL35Q9NZE8 188 aaKnown RBP12.66□□□□□ -0.38
RPN1-201ENST00000296255 IGHV4-39P01824 125 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 ZC2HC1BQ5TFG8 222 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 ZFAND2AQ8N6M9 145 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
RPN1-201ENST00000296255 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.39
RPN1-201ENST00000296255 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
RPN1-201ENST00000296255 K7EP34 96 aa12.64□□□□□ -0.39
RPN1-201ENST00000296255 SOCS3O14543 225 aa12.64□□□□□ -0.39
RPN1-201ENST00000296255 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
RPN1-201ENST00000296255 TMEM160Q9NX00 188 aa12.64□□□□□ -0.39
RPN1-201ENST00000296255 FXYD2P54710 66 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 GTF2H5Q6ZYL4 71 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 TRBV25-1A0A075B6N4 114 aa12.63□□□□□ -0.39
RPN1-201ENST00000296255 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPN1-201ENST00000296255 GCSHP23434 173 aa12.62□□□□□ -0.39
RPN1-201ENST00000296255 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
RPN1-201ENST00000296255 LINC00477Q96M19 166 aa12.62□□□□□ -0.39
RPN1-201ENST00000296255 SPTAN1Q13813 2472 aaKnown RBP12.62□□□□□ -0.39
RPN1-201ENST00000296255 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
RPN1-201ENST00000296255 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
RPN1-201ENST00000296255 A0A087WX48 190 aa12.61□□□□□ -0.39
RPN1-201ENST00000296255 M0R381 172 aa12.61□□□□□ -0.39
RPN1-201ENST00000296255 NDUFA4O00483 81 aa12.61□□□□□ -0.39
RPN1-201ENST00000296255 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
RPN1-201ENST00000296255 IGHV3-11P01762 117 aa12.61□□□□□ -0.39
RPN1-201ENST00000296255 IGHV4-61A0A0C4DH41 118 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 SAP30O75446 220 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 LY6EQ16553 131 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 RASL10AQ92737 203 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 F6UB75 175 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 OVOL1O14753 267 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 VPS25Q9BRG1 176 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 MEGF9Q9H1U4 602 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
RPN1-201ENST00000296255 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
RPN1-201ENST00000296255 K7ERJ3 54 aa12.59□□□□□ -0.39
RPN1-201ENST00000296255 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
RPN1-201ENST00000296255 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
RPN1-201ENST00000296255 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
RPN1-201ENST00000296255 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
RPN1-201ENST00000296255 PHLDA1Q8WV24 401 aaPredicted RBP12.59□□□□□ -0.39
RPN1-201ENST00000296255 SPCS1Q9Y6A9 102 aa12.59□□□□□ -0.39
RPN1-201ENST00000296255 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
RPN1-201ENST00000296255 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
RPN1-201ENST00000296255 Q6ZS46 218 aa12.58□□□□□ -0.4
RPN1-201ENST00000296255 LCNL1Q6ZST4 164 aa12.58□□□□□ -0.4
RPN1-201ENST00000296255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
RPN1-201ENST00000296255 K7EMI3 77 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 K7ERU9 68 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 SUMO2P61956 95 aaKnown RBP12.57□□□□□ -0.4
RPN1-201ENST00000296255 SAMD5Q5TGI4 173 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 IGKV3-7A0A075B6H7 116 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 GNRH2O43555 120 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 IGHG2P01859 326 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 GNLYP22749 145 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
RPN1-201ENST00000296255 ASIPP42127 132 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 RPL11P62913 178 aaKnown RBP12.57□□□□□ -0.4
RPN1-201ENST00000296255 CEND1Q8N111 149 aa12.57□□□□□ -0.4
RPN1-201ENST00000296255 PLNP26678 52 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 BLCAPP62952 87 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 DPH3P1Q9H4G8 78 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 MAP1AP78559 2803 aaPredicted RBP12.56□□□□□ -0.4
RPN1-201ENST00000296255 TRAV12-1A0A0B4J245 112 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 H3BUX3 64 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 TOMM6Q96B49 74 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
RPN1-201ENST00000296255 A6NDX4 124 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 H7C1H1 209 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 BRI3O95415 125 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 PF4V1P10720 104 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 FABP2P12104 132 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
RPN1-201ENST00000296255 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 SPOCK3Q9BQ16 436 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 F8VRH5 84 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 ORMDL2Q53FV1 153 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
RPN1-201ENST00000296255 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
RPN1-201ENST00000296255 H3BUA1 57 aa12.54□□□□□ -0.4
RPN1-201ENST00000296255 MGPP08493 103 aa12.54□□□□□ -0.4
RPN1-201ENST00000296255 EDN2P20800 178 aa12.54□□□□□ -0.4
RPN1-201ENST00000296255 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms