RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 PCP4L1A6NKN8 68 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 SNURFLB1AK76 121 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 J3KRW8 73 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 PRNTQ86SH4 94 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
CCDC140-201ENST00000295226 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 A8MWL6 223 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 PYY3Q5JQD4 70 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 Q86TA4 180 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
CCDC140-201ENST00000295226 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
CCDC140-201ENST00000295226 RBAKDNA6NC62 111 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 M0R2Z0 102 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
CCDC140-201ENST00000295226 AMBPP02760 352 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 Q0VG73 95 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
CCDC140-201ENST00000295226 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
CCDC140-201ENST00000295226 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 P01737 135 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 CRISP2P16562 243 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 ZNF138P52744 262 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 SPINK13Q1W4C9 94 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
CCDC140-201ENST00000295226 TRAV12-2A0A075B6T6 113 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 ESDP10768 282 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 A8MTW9 85 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 TCL1AP56279 114 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
CCDC140-201ENST00000295226 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
CCDC140-201ENST00000295226 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
CCDC140-201ENST00000295226 GIG44P09565 113 aaPredicted RBP11.1□□□□□ -0.63
CCDC140-201ENST00000295226 PRR9Q5T870 116 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 Q6ZQT7 251 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 GSN-AS1Q9NRJ2 163 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
CCDC140-201ENST00000295226 FRMD6-AS1P0C7T7 363 aa11.09□□□□□ -0.63
CCDC140-201ENST00000295226 NEU1Q99519 415 aa11.09□□□□□ -0.63
CCDC140-201ENST00000295226 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 APCSP02743 223 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 RAB4BP61018 213 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
CCDC140-201ENST00000295226 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
CCDC140-201ENST00000295226 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.64
CCDC140-201ENST00000295226 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
CCDC140-201ENST00000295226 DEFA6Q01524 100 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 BAGE3Q86Y29 109 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 MRAPQ8TCY5 172 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
CCDC140-201ENST00000295226 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
CCDC140-201ENST00000295226 CDKN1BP46527 198 aa11.07□□□□□ -0.64
CCDC140-201ENST00000295226 ZNF80P51504 273 aaPredicted RBP11.07□□□□□ -0.64
CCDC140-201ENST00000295226 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
CCDC140-201ENST00000295226 COX8CQ7Z4L0 72 aa11.07□□□□□ -0.64
CCDC140-201ENST00000295226 MEGF8Q7Z7M0 2845 aa11.07□□□□□ -0.64
CCDC140-201ENST00000295226 A0A1B0GXF2 115 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 A8MZ25 164 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 SPINK4O60575 86 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 GPX1P07203 203 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 LEPP41159 167 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 HBBP68871 147 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 Q6AWC8 147 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
CCDC140-201ENST00000295226 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 A0A1B0GW15 77 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
CCDC140-201ENST00000295226 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 TSPOP30536 169 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
CCDC140-201ENST00000295226 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
CCDC140-201ENST00000295226 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 NDFIP1Q9BT67 221 aa11.05□□□□□ -0.64
CCDC140-201ENST00000295226 GRIFINA4D1Z8 144 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 KLLNB2CW77 178 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 PRM2P04554 102 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 CRIP1P50238 77 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
CCDC140-201ENST00000295226 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 GZMBP10144 247 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms