RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 D6R8Y8 96 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 CSN3P07498 182 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 DDTP30046 118 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
PDPN-201ENST00000294489 ZFAND2AQ8N6M9 145 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 MS4A6AQ9H2W1 248 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 OTOGQ6ZRI0 2925 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 F6UB75 175 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 TEX43Q6ZNM6 134 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
PDPN-201ENST00000294489 CKS2P33552 79 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 DEFB1P60022 68 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
PDPN-201ENST00000294489 FA2HQ7L5A8 372 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 AP5S1Q9NUS5 200 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 U3KQK5 164 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 OR5AL1P0C617 328 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 TFPI2P48307 235 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 PRR9Q5T870 116 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 C18orf65Q6ZTR6 163 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 ZNF418Q8TF45 676 aaPredicted RBP6.87□□□□□ -1.31
PDPN-201ENST00000294489 DPF1Q92782 380 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 FAM19A4Q96LR4 140 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 IGHV1-24A0A0C4DH33 117 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 C2orf70A6NJV1 201 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 PPBPP02775 128 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 KHDC1LQ5JSQ8 128 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 VAMP8Q9BV40 100 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 MSRB1Q9NZV6 116 aa6.87□□□□□ -1.31
PDPN-201ENST00000294489 CUBNO60494 3623 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 LINC01619G3V211 115 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 LEPROTL1O95214 131 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 RNASE4P34096 147 aaKnown RBP6.86□□□□□ -1.31
PDPN-201ENST00000294489 CACNG7P62955 275 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 FHL3Q13643 280 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 SPANXN1Q5VSR9 72 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 ADAMTSL5Q6ZMM2 481 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 LINC01006Q8NI28 216 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 CCDC168Q8NDH2 2452 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
PDPN-201ENST00000294489 PSMG4Q5JS54 123 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 JMJD8Q96S16 334 aa6.86□□□□□ -1.31
PDPN-201ENST00000294489 K7EQG2 157 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 SNAI2O43623 268 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 Q6ZQT7 251 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 OR10AG1Q8NH19 301 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 PEMTQ9UBM1 199 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 FASNP49327 2511 aaKnown RBP6.85□□□□□ -1.31
PDPN-201ENST00000294489 KIR2DL5BA0A0G2JN68 375 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 KIR2DL5BA0A0G2JPC4 375 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 H3BVH4 76 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 ASIPP42127 132 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 KIR2DL5AQ8N109 375 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 Q8N976 141 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 TMEM70Q9BUB7 260 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 LAMTOR2Q9Y2Q5 125 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 IGHV4-4A0A075B6R2 117 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
PDPN-201ENST00000294489 SLURP1P55000 103 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 OR1N2Q8NGR9 330 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
PDPN-201ENST00000294489 TRAV2A0A0B4J234 112 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 ANXA2RQ3ZCQ2 193 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 RNF185Q96GF1 192 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 SIGLEC8Q9NYZ4 499 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 KLLNB2CW77 178 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 TCF21O43680 179 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 LEPP41159 167 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 TDRG1Q3Y452 100 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 ODF3Q96PU9 254 aa6.84□□□□□ -1.31
PDPN-201ENST00000294489 TIMM8BQ9Y5J9 83 aaPredicted RBP6.84□□□□□ -1.31
PDPN-201ENST00000294489 TLN2Q9Y4G6 2542 aa6.84□□□□□ -1.32
PDPN-201ENST00000294489 C20orf202A1L168 122 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 NCR2O95944 276 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 EVI2AP22794 236 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 OR9G4Q8NGQ1 327 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 C20orf144Q9BQM9 153 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 PHLDA3Q9Y5J5 127 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 A0A0J9YX75 114 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 DUSP14O95147 198 aaKnown RBP6.83□□□□□ -1.32
PDPN-201ENST00000294489 NPYP01303 97 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 CD28P10747 220 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 PROK1P58294 105 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms