RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TMEM183AQ8IXX5 376 aa19.06■□□□□ 0.64
SSU72-201ENST00000291386 NAGKQ9UJ70 344 aa19.06■□□□□ 0.64
SSU72-201ENST00000291386 FABP5P3A8MUU1 101 aa19.05■□□□□ 0.64
SSU72-201ENST00000291386 SPINK4O60575 86 aa19.05■□□□□ 0.64
SSU72-201ENST00000291386 SDF2L1Q9HCN8 221 aa19.05■□□□□ 0.64
SSU72-201ENST00000291386 C11orf21Q9P2W6 132 aa19.05■□□□□ 0.64
SSU72-201ENST00000291386 ZC2HC1AQ96GY0 325 aa19.04■□□□□ 0.64
SSU72-201ENST00000291386 C18orf15Q96N68 181 aa19.04■□□□□ 0.64
SSU72-201ENST00000291386 MDFICQ9P1T7 246 aa19.04■□□□□ 0.64
SSU72-201ENST00000291386 TYMSP04818 313 aa19.03■□□□□ 0.64
SSU72-201ENST00000291386 LGALS9BQ3B8N2 356 aa19.03■□□□□ 0.64
SSU72-201ENST00000291386 IGHV3-16A0A0C4DH30 117 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 GNRH2O43555 120 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 ATP5G1P05496 136 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 RPL35P42766 123 aaKnown RBP19.02■□□□□ 0.64
SSU72-201ENST00000291386 CRIP1P50238 77 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 FAM210BQ96KR6 192 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 SPXQ9BT56 116 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 MLST8Q9BVC4 326 aa19.02■□□□□ 0.64
SSU72-201ENST00000291386 KMT2CQ8NEZ4 4911 aaKnown RBP19.02■□□□□ 0.63
SSU72-201ENST00000291386 ZNF674Q2M3X9 581 aa19.01■□□□□ 0.63
SSU72-201ENST00000291386 Q6ZTI0 123 aa19.01■□□□□ 0.63
SSU72-201ENST00000291386 BAGE2Q86Y30 109 aa19.01■□□□□ 0.63
SSU72-201ENST00000291386 GAGE12BA1L429 117 aa19■□□□□ 0.63
SSU72-201ENST00000291386 IGLL5B9A064 214 aa19■□□□□ 0.63
SSU72-201ENST00000291386 GAGE7O76087 117 aa19■□□□□ 0.63
SSU72-201ENST00000291386 GAGE12FP0CL80 117 aa19■□□□□ 0.63
SSU72-201ENST00000291386 GAGE12GP0CL81 117 aa19■□□□□ 0.63
SSU72-201ENST00000291386 GAGE12IP0CL82 117 aa19■□□□□ 0.63
SSU72-201ENST00000291386 IGHV4-4A0A075B6R2 117 aa18.99■□□□□ 0.63
SSU72-201ENST00000291386 RBFOX3A6NFN3 312 aa18.99■□□□□ 0.63
SSU72-201ENST00000291386 FAM162BQ5T6X4 162 aa18.99■□□□□ 0.63
SSU72-201ENST00000291386 DERL1Q9BUN8 251 aa18.99■□□□□ 0.63
SSU72-201ENST00000291386 APLNQ9ULZ1 77 aa18.99■□□□□ 0.63
SSU72-201ENST00000291386 LYSTQ99698 3801 aa18.98■□□□□ 0.63
SSU72-201ENST00000291386 TRGV1A0A0A0MS02 117 aa18.98■□□□□ 0.63
SSU72-201ENST00000291386 IGKV3D-20A0A0C4DH25 116 aa18.98■□□□□ 0.63
SSU72-201ENST00000291386 ZNF506Q5JVG8 444 aa18.98■□□□□ 0.63
SSU72-201ENST00000291386 MED9Q9NWA0 146 aa18.98■□□□□ 0.63
SSU72-201ENST00000291386 SH2D1AO60880 128 aa18.97■□□□□ 0.63
SSU72-201ENST00000291386 HTN3P15516 51 aa18.97■□□□□ 0.63
SSU72-201ENST00000291386 RASL10AQ92737 203 aa18.97■□□□□ 0.63
SSU72-201ENST00000291386 LCE6AA0A183 80 aa18.96■□□□□ 0.63
SSU72-201ENST00000291386 NDUFS6O75380 124 aaKnown RBP18.96■□□□□ 0.63
SSU72-201ENST00000291386 NHLRC2Q8NBF2 726 aa18.96■□□□□ 0.63
SSU72-201ENST00000291386 SMIM12Q96EX1 92 aa18.96■□□□□ 0.63
SSU72-201ENST00000291386 NDUFAF3Q9BU61 184 aa18.95■□□□□ 0.62
SSU72-201ENST00000291386 MRPL16Q9NX20 251 aaKnown RBP18.95■□□□□ 0.62
SSU72-201ENST00000291386 TMEM250H0YL14 139 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 M0R2P5 195 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 LINC01559Q495D7 138 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 DNLZQ5SXM8 178 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 C9orf85Q96MD7 179 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 FAM210AQ96ND0 272 aa18.94■□□□□ 0.62
SSU72-201ENST00000291386 TRGV2A0A075B6R0 118 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 KRBOX1C9JBD0 128 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 F5H768 121 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 ORM1P02763 201 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 CENPWQ5EE01 88 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 ALMS1Q8TCU4 4167 aa18.93■□□□□ 0.62
SSU72-201ENST00000291386 B4DEV8 164 aa18.92■□□□□ 0.62
SSU72-201ENST00000291386 IGLV2-8P01709 118 aa18.92■□□□□ 0.62
SSU72-201ENST00000291386 PTH2Q96A98 100 aa18.92■□□□□ 0.62
SSU72-201ENST00000291386 RAB19A4D1S5 217 aa18.91■□□□□ 0.62
SSU72-201ENST00000291386 RNASE3P12724 160 aaKnown RBP18.91■□□□□ 0.62
SSU72-201ENST00000291386 GNG4P50150 75 aa18.91■□□□□ 0.62
SSU72-201ENST00000291386 TOR2AQ5JU69 321 aa18.91■□□□□ 0.62
SSU72-201ENST00000291386 TRBV20OR9-2A0A075B6H5 130 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 TMEM88Q6PEY1 159 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 ZNF575Q86XF7 245 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 LINC00476Q8WZB0 136 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 MUC4Q99102 2169 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 SACSQ9NZJ4 4579 aa18.9■□□□□ 0.62
SSU72-201ENST00000291386 HOXA5P20719 270 aa18.89■□□□□ 0.61
SSU72-201ENST00000291386 ASIPP42127 132 aa18.89■□□□□ 0.61
SSU72-201ENST00000291386 EIF5A2Q9GZV4 153 aaKnown RBP18.89■□□□□ 0.61
SSU72-201ENST00000291386 DNAH1Q9P2D7 4330 aa18.89■□□□□ 0.61
SSU72-201ENST00000291386 M0R036 132 aa18.88■□□□□ 0.61
SSU72-201ENST00000291386 LGALS9CQ6DKI2 356 aa18.88■□□□□ 0.61
SSU72-201ENST00000291386 PCNPQ8WW12 178 aaKnown RBP18.88■□□□□ 0.61
SSU72-201ENST00000291386 IL36BQ9NZH7 164 aa18.88■□□□□ 0.61
SSU72-201ENST00000291386 C9JCJ5 164 aa18.87■□□□□ 0.61
SSU72-201ENST00000291386 S100A4P26447 101 aaKnown RBP18.87■□□□□ 0.61
SSU72-201ENST00000291386 C15orf53Q8NAA6 179 aa18.87■□□□□ 0.61
SSU72-201ENST00000291386 CXCL1P09341 107 aa18.86■□□□□ 0.61
SSU72-201ENST00000291386 PRR27Q6MZM9 219 aa18.86■□□□□ 0.61
SSU72-201ENST00000291386 PARLQ9H300 379 aa18.86■□□□□ 0.61
SSU72-201ENST00000291386 BIN3Q9NQY0 253 aa18.86■□□□□ 0.61
SSU72-201ENST00000291386 OR5I1Q13606 314 aa18.85■□□□□ 0.61
SSU72-201ENST00000291386 PIK3CD-AS1Q5SR53 167 aa18.85■□□□□ 0.61
SSU72-201ENST00000291386 TRAV4A0A0B4J268 109 aa18.84■□□□□ 0.61
SSU72-201ENST00000291386 H3BNG1 76 aa18.84■□□□□ 0.61
SSU72-201ENST00000291386 ZNF876PQ49A33 203 aa18.84■□□□□ 0.61
SSU72-201ENST00000291386 POM121L12Q8N7R1 296 aa18.84■□□□□ 0.61
SSU72-201ENST00000291386 GRIFINA4D1Z8 144 aa18.83■□□□□ 0.6
SSU72-201ENST00000291386 C19orf71A6NCJ1 209 aa18.83■□□□□ 0.6
SSU72-201ENST00000291386 PGPEP1LA6NFU8 196 aa18.83■□□□□ 0.6
SSU72-201ENST00000291386 MGST1P10620 155 aaKnown RBP18.83■□□□□ 0.6
SSU72-201ENST00000291386 SCRT2Q9NQ03 307 aa18.83■□□□□ 0.6
SSU72-201ENST00000291386 SRP19P09132 144 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms