RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
NPC1L1-201ENST00000289547 TRACP01848 142 aa8.98□□□□□ -0.97
NPC1L1-201ENST00000289547 HOXB4P17483 251 aaPredicted RBP8.98□□□□□ -0.97
NPC1L1-201ENST00000289547 TP53TG1Q9Y2A0 90 aa8.98□□□□□ -0.97
NPC1L1-201ENST00000289547 OVOL1O14753 267 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 LINC00158P58513 81 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 LHBP01229 141 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 HLA-DMBP28068 263 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 NEGR1Q7Z3B1 354 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 PDE6HQ13956 83 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 C15orf32Q32M92 178 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 STHQ8IWL8 128 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 SRRM4A7MD48 611 aaKnown RBP8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 SPATA12Q7Z6I5 190 aa8.97□□□□□ -0.97
NPC1L1-201ENST00000289547 SIGLEC15Q6ZMC9 328 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 ATG2AQ2TAZ0 1938 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 FOXI1Q12951 378 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 S100A7L2Q5SY68 101 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 C8orf31Q8N9H6 132 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 CARD19Q96LW7 228 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 CTSZQ9UBR2 303 aa8.96□□□□□ -0.97
NPC1L1-201ENST00000289547 C17orf58Q2M2W7 97 aa8.96□□□□□ -0.98
NPC1L1-201ENST00000289547 TEN1Q86WV5 123 aa8.96□□□□□ -0.98
NPC1L1-201ENST00000289547 A0A087WWL8 130 aa8.96□□□□□ -0.98
NPC1L1-201ENST00000289547 DUX4L9Q6RFH8 374 aaPredicted RBP8.96□□□□□ -0.98
NPC1L1-201ENST00000289547 ANKRD29Q8N6D5 301 aa8.96□□□□□ -0.98
NPC1L1-201ENST00000289547 A0A087WX48 190 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 PAX4O43316 350 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 ZNF833PQ6ZTB9 187 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 PRR25Q96S07 402 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 C2orf70A6NJV1 201 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 HERV-K104P63124 156 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 RNF183Q96D59 192 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 LINC01587Q99440 93 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 DUSP14O95147 198 aaKnown RBP8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 LY6G5BQ8NDX9 201 aa8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 TNRC6AQ8NDV7 1962 aaKnown RBP8.95□□□□□ -0.98
NPC1L1-201ENST00000289547 ELANEP08246 267 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 WT1-ASQ06250 92 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 IGHV3-73A0A0B4J1V6 119 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 LINC01619G3V211 115 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 LTAP01374 205 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 NDPQ00604 133 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 TMEM86BQ8N661 226 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 WFDC11Q8NEX6 87 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 FAM110DQ8TAY7 271 aaPredicted RBP8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 IGF2RP11717 2491 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 RS1O15537 224 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
NPC1L1-201ENST00000289547 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 CFC1P0CG37 223 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 PRIMA1Q86XR5 153 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 J3QQQ9 107 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 IGHV4-59P01825 116 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 C9orf139Q6ZV77 190 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 LINC00477Q96M19 166 aa8.93□□□□□ -0.98
NPC1L1-201ENST00000289547 ZNF134P52741 427 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 UTF1Q5T230 341 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 CENPVL3A0A0U1RRI6 287 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 ATP6V0E1O15342 81 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 RASL10AQ92737 203 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 C11orf1Q9H5F2 150 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 EML5Q05BV3 1969 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 LEPROTO15243 131 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 CTRLP40313 264 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 PTH2Q96A98 100 aa8.92□□□□□ -0.98
NPC1L1-201ENST00000289547 IGHV4-38-2P0DP08 117 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 BBC3Q96PG8 261 aaPredicted RBP8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 KMT2EQ8IZD2 1858 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 Q6ZSR3 168 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 CITED2Q99967 270 aaPredicted RBP8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 HIGD1BQ9P298 99 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 H3BUA1 57 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 GATA1P15976 413 aaPredicted RBP8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 MBD6Q96DN6 1003 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 IGF2BP2-AS1Q96M15 143 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 C1orf43Q9BWL3 253 aa8.91□□□□□ -0.98
NPC1L1-201ENST00000289547 C15orf65H3BRN8 121 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 SOCS3O14543 225 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 FSTL3O95633 263 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 TCTEX1D4Q5JR98 221 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 TMEM14CQ9P0S9 112 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 DYSFO75923 2080 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 ADARB2-AS1A8MUL3 147 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms