RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 KCNS1Q96KK3 526 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 TREM1Q9NP99 234 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 K7EQM0 130 aa9.56□□□□□ -0.88
TPM1-202ENST00000288398 CRYGDP07320 174 aa9.56□□□□□ -0.88
TPM1-202ENST00000288398 TDRG1Q3Y452 100 aa9.56□□□□□ -0.88
TPM1-202ENST00000288398 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
TPM1-202ENST00000288398 A0A087WTM6 91 aa9.55□□□□□ -0.88
TPM1-202ENST00000288398 F6UZH7 168 aa9.55□□□□□ -0.88
TPM1-202ENST00000288398 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
TPM1-202ENST00000288398 ASB13Q8WXK3 278 aa9.55□□□□□ -0.88
TPM1-202ENST00000288398 BOLA1Q9Y3E2 137 aa9.55□□□□□ -0.88
TPM1-202ENST00000288398 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 IGHV3-16A0A0C4DH30 117 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
TPM1-202ENST00000288398 GNRH2O43555 120 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
TPM1-202ENST00000288398 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 OR10G9Q8NGN4 311 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 OR10G7Q8NGN6 311 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 FRZBQ92765 325 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 MARVELD1Q9BSK0 173 aa9.54□□□□□ -0.88
TPM1-202ENST00000288398 SERTM2A0A1B0GWG4 89 aa9.53□□□□□ -0.88
TPM1-202ENST00000288398 EIF3GO75821 320 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM1-202ENST00000288398 TYMSP04818 313 aa9.53□□□□□ -0.88
TPM1-202ENST00000288398 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
TPM1-202ENST00000288398 RAB2AP61019 212 aa9.53□□□□□ -0.88
TPM1-202ENST00000288398 TRAV8-1A0A0A6YYK1 113 aa9.52□□□□□ -0.89
TPM1-202ENST00000288398 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
TPM1-202ENST00000288398 HMGB3O15347 200 aaKnown RBP9.52□□□□□ -0.89
TPM1-202ENST00000288398 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
TPM1-202ENST00000288398 GNG5P63218 68 aa9.52□□□□□ -0.89
TPM1-202ENST00000288398 OR10J3Q5JRS4 329 aa9.52□□□□□ -0.89
TPM1-202ENST00000288398 TAAR5O14804 337 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 CIDEAO60543 219 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 ARL14EPLP0DKL9 152 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 GCSHP23434 173 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 IFITM3Q01628 133 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 RHOHQ15669 191 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
TPM1-202ENST00000288398 APOBP04114 4563 aaKnown RBP9.5□□□□□ -0.89
TPM1-202ENST00000288398 DNAH5Q8TE73 4624 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 MBP02144 154 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 GATA1P15976 413 aaPredicted RBP9.5□□□□□ -0.89
TPM1-202ENST00000288398 TIRAPP58753 221 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 SH3BGRL3Q9H299 93 aa9.5□□□□□ -0.89
TPM1-202ENST00000288398 HSD17B11Q8NBQ5 300 aa9.49□□□□□ -0.89
TPM1-202ENST00000288398 Q9HAA7 133 aa9.49□□□□□ -0.89
TPM1-202ENST00000288398 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
TPM1-202ENST00000288398 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 GCGP01275 180 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 TCRAP04437 139 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 SMUG1Q53HV7 270 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 Q5VSD8 79 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 SLC25A29Q8N8R3 303 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 TMEM167BQ9NRX6 74 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
TPM1-202ENST00000288398 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
TPM1-202ENST00000288398 GCHFRP30047 84 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 CFAP126Q5VTH2 177 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 PRNTQ86SH4 94 aa9.47□□□□□ -0.89
TPM1-202ENST00000288398 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
TPM1-202ENST00000288398 RS1O15537 224 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 CXorf1O96002 111 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
TPM1-202ENST00000288398 XGP55808 180 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 FLI1Q01543 452 aaPredicted RBP9.46□□□□□ -0.9
TPM1-202ENST00000288398 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 LELP1Q5T871 98 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 CYB561D1Q8N8Q1 229 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 PSMG3Q9BT73 122 aaPredicted RBP9.46□□□□□ -0.9
TPM1-202ENST00000288398 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
TPM1-202ENST00000288398 ACTR3CQ9C0K3 210 aaPredicted RBP9.46□□□□□ -0.9
TPM1-202ENST00000288398 IBA57-AS1B1ANH7 110 aa9.45□□□□□ -0.9
TPM1-202ENST00000288398 SUMO1P63165 101 aaKnown RBP9.45□□□□□ -0.9
TPM1-202ENST00000288398 SERF2P84101 59 aa9.45□□□□□ -0.9
TPM1-202ENST00000288398 Q6ZNX1 250 aa9.45□□□□□ -0.9
TPM1-202ENST00000288398 GTSF1LQ9H1H1 148 aa9.45□□□□□ -0.9
TPM1-202ENST00000288398 IFNA7P01567 189 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms