RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SPRY2O43597 315 aa10.1□□□□□ -0.79
SLC28A1-201ENST00000286749 U3KQE9 123 aa10.1□□□□□ -0.79
SLC28A1-201ENST00000286749 CACNA1AO00555 2505 aa10.1□□□□□ -0.79
SLC28A1-201ENST00000286749 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
SLC28A1-201ENST00000286749 CENPVL3A0A0U1RRI6 287 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 ATP5G2Q06055 141 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 IGF2RP11717 2491 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 PLNP26678 52 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 COL6A6A6NMZ7 2263 aa10.09□□□□□ -0.79
SLC28A1-201ENST00000286749 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
SLC28A1-201ENST00000286749 M0R381 172 aa10.08□□□□□ -0.8
SLC28A1-201ENST00000286749 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
SLC28A1-201ENST00000286749 CHD8Q9HCK8 2581 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 IGLL5B9A064 214 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 F8VRH5 84 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 H7C1H1 209 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 NPFFO15130 113 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 DEFB1P60022 68 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
SLC28A1-201ENST00000286749 E9PLD3 99 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 RASL10AQ92737 203 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 UBTD1Q9HAC8 227 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 SUMO2P61956 95 aaKnown RBP10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 TAL2Q16559 108 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
SLC28A1-201ENST00000286749 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 ARL3P36405 182 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 LMO4P61968 165 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 KLRB1Q12918 225 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 UNQ9165/PRO28630Q6UXU0 137 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 BPESC1Q9GZL8 116 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 CHTOPQ9Y3Y2 248 aaKnown RBP10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
SLC28A1-201ENST00000286749 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 OR11H12B2RN74 326 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 MGPP08493 103 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 OR11H1Q8NG94 326 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 PHLDA3Q9Y5J5 127 aa10.04□□□□□ -0.8
SLC28A1-201ENST00000286749 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 TRAV21A0A0B4J279 112 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 ASIPP42127 132 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 HIVEP3Q5T1R4 2406 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 WFDC2Q14508 124 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 FAM223AQ8IWN6 122 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 MOB4Q9Y3A3 225 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 ABCA2Q9BZC7 2435 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 SLC25A16P16260 332 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
SLC28A1-201ENST00000286749 F6UB75 175 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 H3BMG7 143 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 AMTNQ6UX39 209 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 C2orf66Q6UXQ4 117 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 RAXQ9Y2V3 346 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 SOCS3O14543 225 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 OVOL1O14753 267 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 BAALCQ8WXS3 180 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
SLC28A1-201ENST00000286749 MUC4Q99102 2169 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 GNRH2O43555 120 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 SPOCK3Q9BQ16 436 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 F8W1H4 67 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 LGALS1P09382 135 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms