RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
VAMP7-202ENST00000286448 LCNL1Q6ZST4 164 aa10.12□□□□□ -0.79
VAMP7-202ENST00000286448 HOXA3O43365 443 aaPredicted RBP10.12□□□□□ -0.79
VAMP7-202ENST00000286448 IGFL4Q6B9Z1 124 aa10.12□□□□□ -0.79
VAMP7-202ENST00000286448 DYNAPQ8N1N2 210 aa10.12□□□□□ -0.79
VAMP7-202ENST00000286448 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
VAMP7-202ENST00000286448 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
VAMP7-202ENST00000286448 POLQO75417 2590 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 SMCPP49901 116 aaPredicted RBP10.11□□□□□ -0.79
VAMP7-202ENST00000286448 OR11H12B2RN74 326 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 IGHG4P01861 327 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 OR11H1Q8NG94 326 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 OR11H2Q8NH07 326 aa10.11□□□□□ -0.79
VAMP7-202ENST00000286448 DLX4Q92988 240 aaPredicted RBP10.11□□□□□ -0.79
VAMP7-202ENST00000286448 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 EFNA4P52798 201 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 IGSF10Q6WRI0 2623 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 IGHV3OR16-8A0A075B7F1 116 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 TRGV3P03979 118 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 RNF5Q99942 180 aa10.1□□□□□ -0.79
VAMP7-202ENST00000286448 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 F8VRH5 84 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 H7C1H1 209 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 MFAP4P55083 255 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 FHL3Q13643 280 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 NRACQ8N912 160 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 Q6ZUT4 128 aa10.09□□□□□ -0.79
VAMP7-202ENST00000286448 TRAV12-1A0A0B4J245 112 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 NDPQ00604 133 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 ERCC8Q13216 396 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 LY6DQ14210 128 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 SMAD5-AS1Q9Y6J3 95 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 CACNA1AO00555 2505 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
VAMP7-202ENST00000286448 LY6LH3BQJ8 138 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
VAMP7-202ENST00000286448 XGP55808 180 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 CFHR4Q92496 578 aa10.08□□□□□ -0.8
VAMP7-202ENST00000286448 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
VAMP7-202ENST00000286448 A6NJY4 79 aa10.07□□□□□ -0.8
VAMP7-202ENST00000286448 FANCD2OSQ96PS1 177 aa10.07□□□□□ -0.8
VAMP7-202ENST00000286448 UFC1Q9Y3C8 167 aa10.07□□□□□ -0.8
VAMP7-202ENST00000286448 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 IGKV3D-20A0A0C4DH25 116 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 ZFP36P26651 326 aaKnown RBP10.06□□□□□ -0.8
VAMP7-202ENST00000286448 PSMB2P49721 201 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 HES1Q14469 280 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.06□□□□□ -0.8
VAMP7-202ENST00000286448 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 NBR2O15453 112 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 TSPAN13O95857 204 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 C21orf62Q9NYP8 219 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 CSPG4Q6UVK1 2322 aa10.06□□□□□ -0.8
VAMP7-202ENST00000286448 PRAC2D3DTV9 90 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 PTH2Q96A98 100 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-202ENST00000286448 UBE2D1P51668 147 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 PPDPFLQ8WWR9 84 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
VAMP7-202ENST00000286448 ZFP2Q6ZN57 461 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 MSRB2Q9Y3D2 182 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 UBE2D3P61077 147 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 UBE2D2P62837 147 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 TEN1Q86WV5 123 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 RNF183Q96D59 192 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 KLK15Q9H2R5 256 aa10.04□□□□□ -0.8
VAMP7-202ENST00000286448 IGHV7-4-1A0A0J9YVY3 117 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 OR11H6Q8NGC7 330 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 ACACBO00763 2458 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 RNF182Q8N6D2 247 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 LY6G5BQ8NDX9 201 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
VAMP7-202ENST00000286448 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
VAMP7-202ENST00000286448 CTSGP08311 255 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 GATA3P23771 443 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 C5orf64Q2M2E5 130 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 ORMDL2Q53FV1 153 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 C11orf71Q6IPW1 123 aa10.02□□□□□ -0.81
VAMP7-202ENST00000286448 TOMM6Q96B49 74 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms