RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 DEFB106AQ8N104 65 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 ZNF664Q8N3J9 261 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 CMTM2Q8TAZ6 248 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 CST11Q9H112 138 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 SMDT1Q9H4I9 107 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 SCP2D1Q9UJQ7 156 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 GOLGB1Q14789 3259 aaKnown RBP1.86□□□□□ -2.11
CHD1-201ENST00000284049 ZNF93P35789 620 aaPredicted RBP1.86□□□□□ -2.11
CHD1-201ENST00000284049 Q6ZTC4 211 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 PLPP5Q8NEB5 264 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 CLEC2BQ92478 149 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 C11orf1Q9H5F2 150 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 OR51F1A6NGY5 319 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 ZNF861PO60384 105 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 PIPP12273 146 aaPredicted RBP1.86□□□□□ -2.11
CHD1-201ENST00000284049 CD24P25063 80 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 QRFPP83859 136 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 SPINT4Q6UDR6 99 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 SNX29P2Q8IUI4 249 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 OR4X2Q8NGF9 303 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 GFRA4Q9GZZ7 299 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 ATG5Q9H1Y0 275 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 SPTBP11277 2137 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 TRAV12-2A0A075B6T6 113 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 C11orf86A6NJI1 115 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 MUCL1Q96DR8 90 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 RPRMQ9NS64 109 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 CGAP01215 116 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 FOXI2Q6ZQN5 318 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 S100A13Q99584 98 aa1.86□□□□□ -2.11
CHD1-201ENST00000284049 TRBV20-1A0A075B6N2 111 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGKV2-28A0A075B6P5 120 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 A0A096LNJ9 63 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGKV2D-28P01615 120 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 MEIG1Q5JSS6 88 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 SH2D6Q7Z4S9 175 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 B9D2Q9BPU9 175 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 NAA60Q9H7X0 242 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 KLK12Q9UKR0 248 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 RANBP2P49792 3224 aaKnown RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 TMEM262E9PQX1 116 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 TNFP01375 233 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 CD14P08571 375 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 FXYD2P54710 66 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF846Q147U1 533 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 DPY30Q9C005 99 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 MPC1Q9Y5U8 109 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 MINOS1-NBL1R4GNA1 71 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 ASXL3Q9C0F0 2248 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 CPAMD8Q8IZJ3 1885 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 F8W1H4 67 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 TRACP01848 142 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGKV1-16P04430 117 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 TPPP2P59282 170 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 PABPC1L2AQ5JQF8 200 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 MRPL54Q6P161 138 aaKnown RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 C9orf62Q8N4C0 152 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 FAM216BQ8N7L0 139 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 Q8N7P7 452 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 RNF5Q99942 180 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 TNRC6AQ8NDV7 1962 aaKnown RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 GNRH2O43555 120 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGKV1-5P01602 117 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 INSL3P51460 131 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF80P51504 273 aaPredicted RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 FOXA3P55318 350 aaPredicted RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF90Q03938 601 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 CATR1Q13166 79 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 MRGPRG-AS1Q2M3A8 158 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 Q56UQ5 140 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 GKN2Q86XP6 184 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 U3KQA8 63 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 AZU1P20160 251 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 RPRMLQ8N4K4 120 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 RNASE6Q93091 150 aaKnown RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 HHLA3Q9XRX5 114 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 IGHV3-15A0A0B4J1V0 119 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 A0A0J9YX75 114 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 FAM24AA6NFZ4 105 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 EDF1O60869 148 aaKnown RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF22P17026 224 aaPredicted RBP1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF117Q03924 483 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 GLIPR1L1Q6UWM5 242 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 ZNF835Q9Y2P0 537 aa1.85□□□□□ -2.11
CHD1-201ENST00000284049 SPTA1P02549 2419 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 EXPH5Q8NEV8 1989 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 UBR5O95071 2799 aaPredicted RBP1.84□□□□□ -2.11
CHD1-201ENST00000284049 NUMA1Q14980 2115 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 TMEM155Q4W5P6 130 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 SMCR5Q8TEV8 140 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 FKBP11Q9NYL4 201 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 HSPE1-MOB4S4R3N1 261 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 ALPK2Q86TB3 2170 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms