RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CLPSL1A2RUU4 121 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 F8VRH5 84 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 M0R381 172 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 NDUFS8O00217 210 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 PLNP26678 52 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 SCGB3A1Q96QR1 104 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
SSC4D-201ENST00000275560 HLA-DRB4P13762 266 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 RAB9AP51151 201 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 TMEM78Q5T7P6 136 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 PLEKHB2Q96CS7 222 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 HLA-DRB4X5D2U9 266 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 H7C1H1 209 aa14.27□□□□□ -0.12
SSC4D-201ENST00000275560 TAL2Q16559 108 aa14.27□□□□□ -0.12
SSC4D-201ENST00000275560 PTH2Q96A98 100 aa14.27□□□□□ -0.12
SSC4D-201ENST00000275560 PRSS29PA6NIE9 313 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 ODF3BA8MYP8 253 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 APOMO95445 188 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 SMCPP49901 116 aaPredicted RBP14.27□□□□□ -0.13
SSC4D-201ENST00000275560 EMP1P54849 157 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
SSC4D-201ENST00000275560 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.13
SSC4D-201ENST00000275560 G3V318 75 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 SCGB1A1P11684 91 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 ZFP2Q6ZN57 461 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 VMO1Q7Z5L0 202 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 KLHL30-AS1Q8NEE0 82 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 COL12A1Q99715 3063 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 HOXA3O43365 443 aaPredicted RBP14.26□□□□□ -0.13
SSC4D-201ENST00000275560 ZNF502Q8TBZ5 544 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 GLMPQ8WWB7 406 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 SPOCK3Q9BQ16 436 aa14.26□□□□□ -0.13
SSC4D-201ENST00000275560 LINC01549A6NIU2 74 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 SCGB2A2Q13296 93 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 LOC107984156A0A0G2JMH3 177 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 A0A1B0GV72 72 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 FAM90A27PA6NNH2 459 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 TGFAP01135 160 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 CKS1BP61024 79 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 C8orf86Q6ZUL3 223 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 NFE4Q86UQ8 179 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 ARL17AQ8IVW1 177 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 ZNF418Q8TF45 676 aaPredicted RBP14.25□□□□□ -0.13
SSC4D-201ENST00000275560 PRADC1Q9BSG0 188 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 RAXQ9Y2V3 346 aa14.25□□□□□ -0.13
SSC4D-201ENST00000275560 FHL3Q13643 280 aa14.24□□□□□ -0.13
SSC4D-201ENST00000275560 C14orf178Q8N769 122 aaPredicted RBP14.24□□□□□ -0.13
SSC4D-201ENST00000275560 SYT8Q8NBV8 401 aa14.24□□□□□ -0.13
SSC4D-201ENST00000275560 CCDC140Q96MF4 163 aa14.24□□□□□ -0.13
SSC4D-201ENST00000275560 HIF1ANQ9NWT6 349 aa14.24□□□□□ -0.13
SSC4D-201ENST00000275560 PSMB2P49721 201 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 RASL10AQ92737 203 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 ZNF815PA8K554 130 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 ATP6V0E1O15342 81 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 SLC25A16P16260 332 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 PRTN3P24158 256 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 Q8N6K4 173 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 Q8N9W7 124 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
SSC4D-201ENST00000275560 SCGB1D4Q6XE38 83 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 NEXN-AS1Q8NBZ9 246 aa14.23□□□□□ -0.13
SSC4D-201ENST00000275560 RBAKDNA6NC62 111 aa14.22□□□□□ -0.13
SSC4D-201ENST00000275560 MGPP08493 103 aa14.22□□□□□ -0.13
SSC4D-201ENST00000275560 BAALCQ8WXS3 180 aa14.22□□□□□ -0.13
SSC4D-201ENST00000275560 PRSS47A8MTI9 375 aa14.22□□□□□ -0.13
SSC4D-201ENST00000275560 FOXI1Q12951 378 aa14.22□□□□□ -0.13
SSC4D-201ENST00000275560 SCGB2A1O75556 95 aa14.21□□□□□ -0.13
SSC4D-201ENST00000275560 SUMO2P61956 95 aaKnown RBP14.21□□□□□ -0.13
SSC4D-201ENST00000275560 SLC50A1Q9BRV3 221 aa14.21□□□□□ -0.13
SSC4D-201ENST00000275560 C2orf66Q6UXQ4 117 aa14.21□□□□□ -0.14
SSC4D-201ENST00000275560 C20orf173Q96LM9 149 aa14.21□□□□□ -0.14
SSC4D-201ENST00000275560 SRSF9Q13242 221 aaKnown RBP eCLIP14.2□□□□□ -0.14
SSC4D-201ENST00000275560 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 TOMM6Q96B49 74 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 CDIP1Q9H305 208 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 LINC00527Q9UJ94 153 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 PTPRZ1P23471 2315 aaPredicted RBP14.2□□□□□ -0.14
SSC4D-201ENST00000275560 TRAV12-1A0A0B4J245 112 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 TSPAN13O95857 204 aa14.2□□□□□ -0.14
SSC4D-201ENST00000275560 MT-ATP8P03928 68 aa14.19□□□□□ -0.14
SSC4D-201ENST00000275560 TRAV26-1A0A087WT03 109 aa14.19□□□□□ -0.14
SSC4D-201ENST00000275560 ZFP36P26651 326 aaKnown RBP14.19□□□□□ -0.14
SSC4D-201ENST00000275560 C16orf92Q96LL3 132 aa14.19□□□□□ -0.14
SSC4D-201ENST00000275560 RNF223E7ERA6 249 aa14.19□□□□□ -0.14
SSC4D-201ENST00000275560 C1QTNF4Q9BXJ3 329 aa14.19□□□□□ -0.14
SSC4D-201ENST00000275560 IGF2-ASQ6U949 168 aa14.18□□□□□ -0.14
SSC4D-201ENST00000275560 ATRXP46100 2492 aa14.18□□□□□ -0.14
SSC4D-201ENST00000275560 DUSP14O95147 198 aaKnown RBP14.18□□□□□ -0.14
SSC4D-201ENST00000275560 CDSNQ15517 529 aa14.18□□□□□ -0.14
SSC4D-201ENST00000275560 S100A4P26447 101 aaKnown RBP14.17□□□□□ -0.14
SSC4D-201ENST00000275560 ORMDL2Q53FV1 153 aa14.17□□□□□ -0.14
SSC4D-201ENST00000275560 DLX4Q92988 240 aaPredicted RBP14.17□□□□□ -0.14
SSC4D-201ENST00000275560 MRAP2Q96G30 205 aa14.17□□□□□ -0.14
SSC4D-201ENST00000275560 IGKV3-7A0A075B6H7 116 aa14.17□□□□□ -0.14
SSC4D-201ENST00000275560 M0R1W7 72 aa14.17□□□□□ -0.14
SSC4D-201ENST00000275560 C9orf47Q6ZRZ4 202 aa14.17□□□□□ -0.14
SSC4D-201ENST00000275560 FAM110DQ8TAY7 271 aaPredicted RBP14.17□□□□□ -0.14
SSC4D-201ENST00000275560 IGHV4-4A0A075B6R2 117 aa14.16□□□□□ -0.14
SSC4D-201ENST00000275560 METTL26Q96S19 204 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms