RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
HERC6-202ENST00000273960 DOPEY2Q9Y3R5 2298 aa9.96□□□□□ -0.81
HERC6-202ENST00000273960 NDUFB3O43676 98 aa9.96□□□□□ -0.81
HERC6-202ENST00000273960 CRLF1O75462 422 aa9.96□□□□□ -0.81
HERC6-202ENST00000273960 LGALS1P09382 135 aaKnown RBP9.96□□□□□ -0.81
HERC6-202ENST00000273960 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 M0R381 172 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 LY6HO94772 140 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 LAGE3Q14657 143 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.82
HERC6-202ENST00000273960 A8MWV9 139 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 CRIP2P52943 208 aaPredicted RBP9.95□□□□□ -0.82
HERC6-202ENST00000273960 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 Q1RN00 199 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 GAGE2EQ4V326 116 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 PPDPFLQ8WWR9 84 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 GAGE2DQ9UEU5 116 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 MYO18BQ8IUG5 2567 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 SORL1Q92673 2214 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 MGPP08493 103 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 CFHR4Q92496 578 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 CENPEQ02224 2701 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 HIVEP3Q5T1R4 2406 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
HERC6-202ENST00000273960 SNCGO76070 127 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 IGLV1-44P01699 117 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 A0A087WX48 190 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 H3BRN7 92 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 CCL21O00585 134 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 ZNF688P0C7X2 276 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 DYNAPQ8N1N2 210 aa9.94□□□□□ -0.82
HERC6-202ENST00000273960 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
HERC6-202ENST00000273960 I3L2K1 104 aa9.93□□□□□ -0.82
HERC6-202ENST00000273960 TMEM14CQ9P0S9 112 aa9.93□□□□□ -0.82
HERC6-202ENST00000273960 TEN1Q86WV5 123 aa9.93□□□□□ -0.82
HERC6-202ENST00000273960 Q8N8P6 123 aa9.93□□□□□ -0.82
HERC6-202ENST00000273960 K7EIM0 57 aa9.92□□□□□ -0.82
HERC6-202ENST00000273960 HOXB4P17483 251 aaPredicted RBP9.92□□□□□ -0.82
HERC6-202ENST00000273960 FAM159AQ6UWV7 190 aa9.92□□□□□ -0.82
HERC6-202ENST00000273960 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
HERC6-202ENST00000273960 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
HERC6-202ENST00000273960 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
HERC6-202ENST00000273960 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
HERC6-202ENST00000273960 H7C1H1 209 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 LY6DQ14210 128 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 Q6ZS46 218 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
HERC6-202ENST00000273960 DEFB1P60022 68 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 C2CD3Q4AC94 2353 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 F8VRH5 84 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 CEACAM4O75871 244 aa9.91□□□□□ -0.82
HERC6-202ENST00000273960 NHLRC4P0CG21 123 aaPredicted RBP9.91□□□□□ -0.82
HERC6-202ENST00000273960 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
HERC6-202ENST00000273960 IGFL3Q6UXB1 125 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 OR11H6Q8NGC7 330 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE12JA6NER3 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 A6NJY4 79 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE7O76087 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 IGLC6P0CF74 106 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 IGHV1-8P0DP01 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 PLNP26678 52 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 NBL1P41271 181 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GAGE4Q13068 117 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
HERC6-202ENST00000273960 IGHV1-3A0A0C4DH29 117 aa9.9□□□□□ -0.83
HERC6-202ENST00000273960 SRSF1Q07955 248 aaKnown RBP eCLIP9.9□□□□□ -0.83
HERC6-202ENST00000273960 ADIPOQQ15848 244 aa9.9□□□□□ -0.83
HERC6-202ENST00000273960 C14orf178Q8N769 122 aaPredicted RBP9.9□□□□□ -0.83
HERC6-202ENST00000273960 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.89□□□□□ -0.83
HERC6-202ENST00000273960 C17orf100A8MU93 164 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 SLC25A20O43772 301 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 CLEC3BP05452 202 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
HERC6-202ENST00000273960 TAL2Q16559 108 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 COL27A1Q8IZC6 1860 aaPredicted RBP9.89□□□□□ -0.83
HERC6-202ENST00000273960 DCHS2Q6V1P9 2916 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 CSPG4Q6UVK1 2322 aa9.89□□□□□ -0.83
HERC6-202ENST00000273960 IGKV3D-20A0A0C4DH25 116 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 CD3EP07766 207 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 NPC2P61916 151 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 Q8NA96 180 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 CUBNO60494 3623 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 TIMM23O14925 209 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 TRAV2A0A0B4J234 112 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 TEX49A0A1B0GTD5 131 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
HERC6-202ENST00000273960 S100A4P26447 101 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms