RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF502Q8TBZ5 544 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 GLMPQ8WWB7 406 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
COL8A1-202ENST00000273342 CEACAM3P40198 252 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 PSMB2P49721 201 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 CKS1BP61024 79 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 NRACQ8N912 160 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 ATP6V0BQ99437 205 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 LINC00527Q9UJ94 153 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL8A1-202ENST00000273342 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 ZFP2Q6ZN57 461 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 G3V318 75 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 MGPP08493 103 aa9.92□□□□□ -0.82
COL8A1-202ENST00000273342 SRSF1Q07955 248 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL8A1-202ENST00000273342 C14orf178Q8N769 122 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-202ENST00000273342 SYT8Q8NBV8 401 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 SMPXQ9UHP9 88 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 B9A039 149 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 HOXA3O43365 443 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-202ENST00000273342 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 PIFOQ8TCI5 191 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 PLEKHB2Q96CS7 222 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 RNF5Q99942 180 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 RAXQ9Y2V3 346 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 CSPG4Q6UVK1 2322 aa9.91□□□□□ -0.82
COL8A1-202ENST00000273342 A0A1B0GV72 72 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 CNFNQ9BYD5 112 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 DOPEY2Q9Y3R5 2298 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 IGHV7-4-1A0A0J9YVY3 117 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 BUB3O43684 328 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 PRR9Q5T870 116 aa9.9□□□□□ -0.82
COL8A1-202ENST00000273342 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.82
COL8A1-202ENST00000273342 ZNF815PA8K554 130 aa9.9□□□□□ -0.83
COL8A1-202ENST00000273342 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.83
COL8A1-202ENST00000273342 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 SLC25A16P16260 332 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
COL8A1-202ENST00000273342 NPBQ8NG41 125 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 IGHV7-81A0A0B4J1V7 117 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 F8VRH5 84 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 H7C1H1 209 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 LGALS1P09382 135 aaKnown RBP9.89□□□□□ -0.83
COL8A1-202ENST00000273342 COX8CQ7Z4L0 72 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 PSMG3-AS1Q96PY0 264 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 MSRB2Q9Y3D2 182 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 HIVEP3Q5T1R4 2406 aa9.89□□□□□ -0.83
COL8A1-202ENST00000273342 PRSS29PA6NIE9 313 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 PLNP26678 52 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 NFE4Q86UQ8 179 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 Q8NA96 180 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 VMO1Q7Z5L0 202 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 CENPEQ02224 2701 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 ARL3P36405 182 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 RPL11P62913 178 aaKnown RBP9.88□□□□□ -0.83
COL8A1-202ENST00000273342 C8orf86Q6ZUL3 223 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
COL8A1-202ENST00000273342 NOTCH3Q9UM47 2321 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 ATP6V0E1O15342 81 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-202ENST00000273342 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 LINC01546A6NGU7 62 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 MT-ATP8P03928 68 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 CDSNQ15517 529 aa9.87□□□□□ -0.83
COL8A1-202ENST00000273342 C2orf66Q6UXQ4 117 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 OR11H6Q8NGC7 330 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 VPS13CQ709C8 3753 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 F6UB75 175 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 H7C2G1 150 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 CCL21O00585 134 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 SPINK8P0C7L1 97 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 FOXI1Q12951 378 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 ZFAND3Q9H8U3 227 aa9.86□□□□□ -0.83
COL8A1-202ENST00000273342 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 SCGB2A1O75556 95 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
COL8A1-202ENST00000273342 FHL3Q13643 280 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 TCF15Q12870 199 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 RASL10AQ92737 203 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
COL8A1-202ENST00000273342 SORL1Q92673 2214 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 GNRH2O43555 120 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 DUSP14O95147 198 aaKnown RBP9.85□□□□□ -0.83
COL8A1-202ENST00000273342 BAALCQ8WXS3 180 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 CCDC140Q96MF4 163 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 PHLDA3Q9Y5J5 127 aa9.85□□□□□ -0.83
COL8A1-202ENST00000273342 IGHV3OR16-10A0A075B7F0 116 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 TAL2Q16559 108 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 TSPAN13O95857 204 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms