RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 RAB9AP51151 201 aa16.89■□□□□ 0.29
CDR2-201ENST00000268383 LAGE3Q14657 143 aa16.89■□□□□ 0.29
CDR2-201ENST00000268383 LMO4P61968 165 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 SMIM15Q7Z3B0 74 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 C5orf56Q8N8D9 126 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 GLMPQ8WWB7 406 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 NPFFR1Q9GZQ6 430 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 NHP2Q9NX24 153 aaKnown RBP16.88■□□□□ 0.29
CDR2-201ENST00000268383 NPFFO15130 113 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 ATP5G2Q06055 141 aa16.88■□□□□ 0.29
CDR2-201ENST00000268383 CSPG4Q6UVK1 2322 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 SMIM13P0DJ93 91 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 SAMD5Q5TGI4 173 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 ITPR1Q14643 2758 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 F6UB75 175 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 LCNL1Q6ZST4 164 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 MYOZ3Q8TDC0 251 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 CSTL1Q9H114 145 aa16.87■□□□□ 0.29
CDR2-201ENST00000268383 C9orf47Q6ZRZ4 202 aa16.86■□□□□ 0.29
CDR2-201ENST00000268383 IGHV3-11P01762 117 aa16.86■□□□□ 0.29
CDR2-201ENST00000268383 RPL39LQ96EH5 51 aaKnown RBP16.85■□□□□ 0.29
CDR2-201ENST00000268383 CSMD2Q7Z408 3487 aa16.85■□□□□ 0.29
CDR2-201ENST00000268383 TRBV7-1A0A0A6YYK4 115 aa16.84■□□□□ 0.29
CDR2-201ENST00000268383 GPHB5Q86YW7 130 aa16.84■□□□□ 0.29
CDR2-201ENST00000268383 U3KQE9 123 aa16.84■□□□□ 0.29
CDR2-201ENST00000268383 ATP5LO75964 103 aa16.84■□□□□ 0.29
CDR2-201ENST00000268383 RPL11P62913 178 aaKnown RBP16.84■□□□□ 0.29
CDR2-201ENST00000268383 C14orf178Q8N769 122 aaPredicted RBP16.84■□□□□ 0.29
CDR2-201ENST00000268383 TRAV41A0A0B4J266 112 aa16.83■□□□□ 0.29
CDR2-201ENST00000268383 FABP2P12104 132 aa16.83■□□□□ 0.29
CDR2-201ENST00000268383 HIF1ANQ9NWT6 349 aa16.83■□□□□ 0.29
CDR2-201ENST00000268383 LY6DQ14210 128 aa16.83■□□□□ 0.28
CDR2-201ENST00000268383 LY6EQ16553 131 aa16.83■□□□□ 0.28
CDR2-201ENST00000268383 PIFOQ8TCI5 191 aa16.83■□□□□ 0.28
CDR2-201ENST00000268383 ARL3P36405 182 aa16.83■□□□□ 0.28
CDR2-201ENST00000268383 SORL1Q92673 2214 aa16.82■□□□□ 0.28
CDR2-201ENST00000268383 SRD5A1P18405 259 aa16.82■□□□□ 0.28
CDR2-201ENST00000268383 WFDC12Q8WWY7 111 aa16.82■□□□□ 0.28
CDR2-201ENST00000268383 MUC4Q99102 2169 aa16.81■□□□□ 0.28
CDR2-201ENST00000268383 A0A087WX48 190 aa16.81■□□□□ 0.28
CDR2-201ENST00000268383 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.286e-7■■□□□ 12.2
CDR2-201ENST00000268383 NEGR1Q7Z3B1 354 aa16.81■□□□□ 0.28
CDR2-201ENST00000268383 CEND1Q8N111 149 aa16.81■□□□□ 0.28
CDR2-201ENST00000268383 PHLDA1Q8WV24 401 aaPredicted RBP16.81■□□□□ 0.28
CDR2-201ENST00000268383 HIGD1BQ9P298 99 aa16.81■□□□□ 0.28
CDR2-201ENST00000268383 DOPEY2Q9Y3R5 2298 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 C19orf84I3L1E1 186 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 GNRH2O43555 120 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 ZFAND2AQ8N6M9 145 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 SMIM2Q9BVW6 85 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 MGPP08493 103 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 S100A4P26447 101 aaKnown RBP16.8■□□□□ 0.28
CDR2-201ENST00000268383 KLK9Q2XQG4 91 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 ITLN2Q8WWU7 325 aaPredicted RBP16.8■□□□□ 0.28
CDR2-201ENST00000268383 RASL10AQ92737 203 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 KLK9Q9UKQ9 250 aa16.8■□□□□ 0.28
CDR2-201ENST00000268383 EDN2P20800 178 aa16.79■□□□□ 0.28
CDR2-201ENST00000268383 RNASE4P34096 147 aaKnown RBP16.79■□□□□ 0.28
CDR2-201ENST00000268383 ANXA2RQ3ZCQ2 193 aa16.79■□□□□ 0.28
CDR2-201ENST00000268383 SMPXQ9UHP9 88 aa16.79■□□□□ 0.28
CDR2-201ENST00000268383 G3V4G9 280 aa16.78■□□□□ 0.28
CDR2-201ENST00000268383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.78■□□□□ 0.28
CDR2-201ENST00000268383 RPL24P83731 157 aaKnown RBP16.78■□□□□ 0.28
CDR2-201ENST00000268383 Q6ZS46 218 aa16.78■□□□□ 0.28
CDR2-201ENST00000268383 MRPL53Q96EL3 112 aaKnown RBP16.78■□□□□ 0.28
CDR2-201ENST00000268383 MTURNQ8N3F0 131 aa16.77■□□□□ 0.28
CDR2-201ENST00000268383 IGHV4-4A0A075B6R2 117 aa16.77■□□□□ 0.28
CDR2-201ENST00000268383 SCGB3A1Q96QR1 104 aa16.76■□□□□ 0.27
CDR2-201ENST00000268383 MOB4Q9Y3A3 225 aa16.76■□□□□ 0.27
CDR2-201ENST00000268383 UTP20O75691 2785 aaKnown RBP16.76■□□□□ 0.27
CDR2-201ENST00000268383 PHLDA3Q9Y5J5 127 aa16.76■□□□□ 0.27
CDR2-201ENST00000268383 SUMO2P61956 95 aaKnown RBP16.76■□□□□ 0.27
CDR2-201ENST00000268383 C9orf139Q6ZV77 190 aa16.76■□□□□ 0.27
CDR2-201ENST00000268383 OR5A1Q8NGJ0 315 aa16.76■□□□□ 0.27
CDR2-201ENST00000268383 PRSS47A8MTI9 375 aa16.75■□□□□ 0.27
CDR2-201ENST00000268383 HIST1H4GQ99525 98 aa16.75■□□□□ 0.27
CDR2-201ENST00000268383 TM2D2Q9BX73 214 aa16.75■□□□□ 0.27
CDR2-201ENST00000268383 AMTNQ6UX39 209 aa16.75■□□□□ 0.27
CDR2-201ENST00000268383 OR10J6PQ8NGY7 276 aa16.75■□□□□ 0.27
CDR2-201ENST00000268383 C19orf54Q5BKX5 351 aa16.74■□□□□ 0.27
CDR2-201ENST00000268383 SPOCK3Q9BQ16 436 aa16.74■□□□□ 0.27
CDR2-201ENST00000268383 TEX48A0A1B0GUV7 120 aa16.74■□□□□ 0.27
CDR2-201ENST00000268383 IGHV4-38-2P0DP08 117 aa16.74■□□□□ 0.27
CDR2-201ENST00000268383 JPT2Q9H910 190 aa16.74■□□□□ 0.27
CDR2-201ENST00000268383 CHTOPQ9Y3Y2 248 aaKnown RBP16.74■□□□□ 0.27
CDR2-201ENST00000268383 RNF223E7ERA6 249 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 BLCAPP62952 87 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 F8VRH5 84 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 IGHV4-39P01824 125 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 EMP1P54849 157 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 MRAP2Q96G30 205 aa16.73■□□□□ 0.27
CDR2-201ENST00000268383 IGLL5B9A064 214 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 H7C1H1 209 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 SOCS3O14543 225 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 TRAV21A0A0B4J279 112 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 ASIPP42127 132 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 C12orf74Q32Q52 190 aa16.72■□□□□ 0.27
CDR2-201ENST00000268383 PF4V1P10720 104 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 CYSLTR1Q9Y271 337 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 FAM223BA6NKX1 122 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms