RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE7O76087 117 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE2BQ13066 116 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE4Q13068 117 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
PCNP-201ENST00000265260 PRAC2D3DTV9 90 aa12.68□□□□□ -0.38
PCNP-201ENST00000265260 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
PCNP-201ENST00000265260 CFC1P0CG37 223 aa12.68□□□□□ -0.38
PCNP-201ENST00000265260 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
PCNP-201ENST00000265260 SCGB1C2P0DMR2 95 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 DLX1P56177 255 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 C21orf62Q9NYP8 219 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
PCNP-201ENST00000265260 CENPVL3A0A0U1RRI6 287 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 H3BVH4 76 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
PCNP-201ENST00000265260 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 NBR2O15453 112 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 SLC25A20O43772 301 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 NPBQ8NG41 125 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 RAX2Q96IS3 184 aa12.66□□□□□ -0.38
PCNP-201ENST00000265260 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
PCNP-201ENST00000265260 SNCGO76070 127 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 PLA2G2CQ5R387 149 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 PRO1854Q9UHT4 67 aa12.65□□□□□ -0.38
PCNP-201ENST00000265260 IFITM1P13164 125 aa12.65□□□□□ -0.39
PCNP-201ENST00000265260 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.39
PCNP-201ENST00000265260 C2orf66Q6UXQ4 117 aa12.65□□□□□ -0.39
PCNP-201ENST00000265260 SLC25A29Q8N8R3 303 aa12.65□□□□□ -0.39
PCNP-201ENST00000265260 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.39
PCNP-201ENST00000265260 CTSGP08311 255 aa12.64□□□□□ -0.39
PCNP-201ENST00000265260 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
PCNP-201ENST00000265260 TRAV4A0A0B4J268 109 aa12.63□□□□□ -0.39
PCNP-201ENST00000265260 CCDC179H3BU77 68 aa12.63□□□□□ -0.39
PCNP-201ENST00000265260 TIMM23O14925 209 aa12.63□□□□□ -0.39
PCNP-201ENST00000265260 SCGB2A1O75556 95 aa12.63□□□□□ -0.39
PCNP-201ENST00000265260 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
PCNP-201ENST00000265260 HERVK_113P61574 105 aa12.63□□□□□ -0.39
PCNP-201ENST00000265260 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
PCNP-201ENST00000265260 CNOT1A5YKK6 2376 aaKnown RBP12.63□□□□□ -0.39
PCNP-201ENST00000265260 TRAV8-2A0A0B4J237 113 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 CRYGDP07320 174 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 HERV-K104P63124 156 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 CDX4O14627 284 aaPredicted RBP12.62□□□□□ -0.39
PCNP-201ENST00000265260 COX7A1P24310 79 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 ONECUT1Q9UBC0 465 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 MSRB2Q9Y3D2 182 aa12.62□□□□□ -0.39
PCNP-201ENST00000265260 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 M0R381 172 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 CRLF1O75462 422 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 PRTN3P24158 256 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
PCNP-201ENST00000265260 C9JAW5 83 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 P0DMU3 169 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
PCNP-201ENST00000265260 C11orf86A6NJI1 115 aa12.6□□□□□ -0.39
PCNP-201ENST00000265260 PRR30Q53SZ7 412 aaPredicted RBP12.6□□□□□ -0.39
PCNP-201ENST00000265260 Q6ZS46 218 aa12.6□□□□□ -0.39
PCNP-201ENST00000265260 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
PCNP-201ENST00000265260 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
PCNP-201ENST00000265260 Q8N1Y9 231 aa12.6□□□□□ -0.39
PCNP-201ENST00000265260 IGHV1-69DA0A0B4J2H0 117 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 BUB3O43684 328 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 TGFAP01135 160 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
PCNP-201ENST00000265260 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
PCNP-201ENST00000265260 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 IGHV3-33P01772 117 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 SMIM20Q8N5G0 67 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 ODF3Q96PU9 254 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 AMELXQ99217 191 aa12.59□□□□□ -0.39
PCNP-201ENST00000265260 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
PCNP-201ENST00000265260 RPL39LQ96EH5 51 aaKnown RBP12.58□□□□□ -0.4
PCNP-201ENST00000265260 DPH3P1Q9H4G8 78 aa12.58□□□□□ -0.4
PCNP-201ENST00000265260 TSHBP01222 138 aa12.57□□□□□ -0.4
PCNP-201ENST00000265260 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
PCNP-201ENST00000265260 BSPH1Q075Z2 132 aa12.57□□□□□ -0.4
PCNP-201ENST00000265260 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
PCNP-201ENST00000265260 A0A0B4J2C4 111 aa12.56□□□□□ -0.4
PCNP-201ENST00000265260 PPP1R17O96001 155 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms