RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 UPK3BQ9BT76 320 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 THSD7AQ9UPZ6 1657 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 DEFB131AP59861 70 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 GAFA1Q96PS6 74 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 ARHGAP32A7KAX9 2087 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 MBD3L4A6NDZ8 208 aaPredicted RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 MBD3L3A6NE82 208 aaPredicted RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 MBD3L5A6NJ08 208 aaPredicted RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 ETV2O00321 342 aaPredicted RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 ANGP03950 147 aaKnown RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 CELA3BP08861 270 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 MBD3L2Q8NHZ7 208 aaPredicted RBP4.35□□□□□ -1.71
XRN1-201ENST00000264951 ZNF503Q96F45 646 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 MED13Q9UHV7 2174 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 HIVEP3Q5T1R4 2406 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 TRAV26-1A0A087WT03 109 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 MUC7Q8TAX7 377 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 RNF138Q8WVD3 245 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 IGHV3OR16-10A0A075B7F0 116 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 A0A1W2PRX2 142 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 C10orf55Q5SWW7 151 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 LINC00527Q9UJ94 153 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 COX7A2LO14548 114 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 CD177Q8N6Q3 437 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 K7ERJ3 54 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 NXPH4O95158 308 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 FAM201AQ5SY85 155 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 Q6ZS92 163 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 LRRC75A-AS1Q8N1F1 130 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 COX7B2Q8TF08 81 aa4.34□□□□□ -1.71
XRN1-201ENST00000264951 IGKV1-27A0A075B6S5 117 aa4.34□□□□□ -1.72
XRN1-201ENST00000264951 TRAV4A0A0B4J268 109 aa4.34□□□□□ -1.72
XRN1-201ENST00000264951 BPY2O14599 106 aa4.34□□□□□ -1.72
XRN1-201ENST00000264951 DKK1O94907 266 aa4.34□□□□□ -1.72
XRN1-201ENST00000264951 FGF23Q9GZV9 251 aaPredicted RBP4.34□□□□□ -1.72
XRN1-201ENST00000264951 ZNF462Q96JM2 2506 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 A0A1B0GUS0 222 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 KAAG1Q9UBP8 84 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 LCNL1Q6ZST4 164 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 FXYD5Q96DB9 178 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PSME4Q14997 1843 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PATE3B3GLJ2 98 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 CGB7P0DN87 165 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR30Q53SZ7 412 aaPredicted RBP4.33□□□□□ -1.72
XRN1-201ENST00000264951 ZNF524Q96C55 264 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PTPN13Q12923 2485 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 NCKAP5O14513 1909 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 TIRAPP58753 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 UBE2E2Q96LR5 201 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PTPRDP23468 1912 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR20EP86478 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR20CP86479 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR20DP86480 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR20BP86481 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 PRR20AP86496 221 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 ZC2HC1AQ96GY0 325 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 NDUFA7O95182 113 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 FXYD7P58549 80 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 GGNQ86UU5 652 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 C16orf74Q96GX8 76 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 THADAQ6YHU6 1953 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 TRBV10-1A0A0K0K1A3 114 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 ANXA2RQ3ZCQ2 193 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 HIST2H2BCQ6DN03 193 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 ZNF837Q96EG3 531 aaPredicted RBP4.33□□□□□ -1.72
XRN1-201ENST00000264951 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 CAMK2N2Q96S95 79 aa4.33□□□□□ -1.72
XRN1-201ENST00000264951 IGKV1D-17A0A075B6S4 117 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 SAA4P35542 130 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 CSPG4Q6UVK1 2322 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 RPL35AP18077 110 aaKnown RBP4.32□□□□□ -1.72
XRN1-201ENST00000264951 HIST2H2BDQ6DRA6 164 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 PTH2Q96A98 100 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 GREB1Q4ZG55 1949 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 NDPQ00604 133 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 FAM219BQ5XKK7 198 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 Q6ZRM9 215 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 HIVEP2P31629 2446 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 CGB3P0DN86 165 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 SPINK13Q1W4C9 94 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 H7C423 109 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 TEX36Q5VZQ5 186 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 HOXB4P17483 251 aaPredicted RBP4.32□□□□□ -1.72
XRN1-201ENST00000264951 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 ARID2Q68CP9 1835 aa4.32□□□□□ -1.72
XRN1-201ENST00000264951 IGKV1-16P04430 117 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 TMEM89A2RUT3 159 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms