RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 Q8N8P6 123 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 PHLDA1Q8WV24 401 aaPredicted RBP12.61□□□□□ -0.39
ZNF541-201ENST00000263351 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 NXT2Q9NPJ8 142 aaKnown RBP12.61□□□□□ -0.39
ZNF541-201ENST00000263351 RAXQ9Y2V3 346 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 DPM2O94777 84 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 S100A7AQ86SG5 101 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 BPESC1Q9GZL8 116 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 MUC4Q99102 2169 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 EMP1P54849 157 aa12.6□□□□□ -0.39
ZNF541-201ENST00000263351 CREBBPQ92793 2442 aa12.59□□□□□ -0.39
ZNF541-201ENST00000263351 G3V4G9 280 aa12.59□□□□□ -0.39
ZNF541-201ENST00000263351 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
ZNF541-201ENST00000263351 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
ZNF541-201ENST00000263351 SIVA1O15304 175 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 FABP2P12104 132 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 POLQO75417 2590 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 WFDC2Q14508 124 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 LAGE3Q14657 143 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
ZNF541-201ENST00000263351 COL25A1Q9BXS0 654 aaPredicted RBP12.58□□□□□ -0.4
ZNF541-201ENST00000263351 LINC01546A6NGU7 62 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 GNRH2O43555 120 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 SMIM15Q7Z3B0 74 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 HIF1ANQ9NWT6 349 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 CEND1Q8N111 149 aa12.57□□□□□ -0.4
ZNF541-201ENST00000263351 H3BMG7 143 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 MGPP08493 103 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 RPL11P62913 178 aaKnown RBP12.56□□□□□ -0.4
ZNF541-201ENST00000263351 LY6EQ16553 131 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 Q6ZS46 218 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 METTL26Q96S19 204 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 JPT2Q9H910 190 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 CENPVL3A0A0U1RRI6 287 aa12.56□□□□□ -0.4
ZNF541-201ENST00000263351 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
ZNF541-201ENST00000263351 SPOCK3Q9BQ16 436 aa12.55□□□□□ -0.4
ZNF541-201ENST00000263351 USP9YO00507 2555 aaPredicted RBP12.55□□□□□ -0.4
ZNF541-201ENST00000263351 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
ZNF541-201ENST00000263351 RASL10AQ92737 203 aa12.55□□□□□ -0.4
ZNF541-201ENST00000263351 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
ZNF541-201ENST00000263351 SLC50A1Q9BRV3 221 aa12.54□□□□□ -0.4
ZNF541-201ENST00000263351 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
ZNF541-201ENST00000263351 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
ZNF541-201ENST00000263351 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
ZNF541-201ENST00000263351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
ZNF541-201ENST00000263351 RNASE4P34096 147 aaKnown RBP12.53□□□□□ -0.4
ZNF541-201ENST00000263351 INSL3P51460 131 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 A0A087WX48 190 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 IGLL5B9A064 214 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 UBE2E1P51965 193 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 SRSF2Q01130 221 aaKnown RBP12.53□□□□□ -0.4
ZNF541-201ENST00000263351 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
ZNF541-201ENST00000263351 LMO4P61968 165 aa12.52□□□□□ -0.4
ZNF541-201ENST00000263351 LY6DQ14210 128 aa12.52□□□□□ -0.4
ZNF541-201ENST00000263351 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.4
ZNF541-201ENST00000263351 SMIM2Q9BVW6 85 aa12.52□□□□□ -0.4
ZNF541-201ENST00000263351 RBAKDNA6NC62 111 aa12.52□□□□□ -0.41
ZNF541-201ENST00000263351 C19orf84I3L1E1 186 aa12.52□□□□□ -0.41
ZNF541-201ENST00000263351 SCGB2A1O75556 95 aa12.52□□□□□ -0.41
ZNF541-201ENST00000263351 ATP5G2Q06055 141 aa12.52□□□□□ -0.41
ZNF541-201ENST00000263351 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
ZNF541-201ENST00000263351 NPFFO15130 113 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 ATP5LO75964 103 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 GTSF1LQ9H1H1 148 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 TMEM238C9JI98 176 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 S100A4P26447 101 aaKnown RBP12.51□□□□□ -0.41
ZNF541-201ENST00000263351 NBL1P41271 181 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 SCGB3A1Q96QR1 104 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 HIGD1BQ9P298 99 aa12.51□□□□□ -0.41
ZNF541-201ENST00000263351 ARL3P36405 182 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 ETDBQ3ZM63 59 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 TM2D2Q9BX73 214 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 TRAV41A0A0B4J266 112 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZNF541-201ENST00000263351 U3KQE9 123 aa12.5□□□□□ -0.41
ZNF541-201ENST00000263351 OOSP1A8MZH6 123 aa12.49□□□□□ -0.41
ZNF541-201ENST00000263351 OR5A1Q8NGJ0 315 aa12.49□□□□□ -0.41
ZNF541-201ENST00000263351 PIFOQ8TCI5 191 aa12.49□□□□□ -0.41
ZNF541-201ENST00000263351 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
ZNF541-201ENST00000263351 DUSP14O95147 198 aaKnown RBP12.49□□□□□ -0.41
ZNF541-201ENST00000263351 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
ZNF541-201ENST00000263351 CHTOPQ9Y3Y2 248 aaKnown RBP12.49□□□□□ -0.41
ZNF541-201ENST00000263351 BLCAPP62952 87 aa12.48□□□□□ -0.41
ZNF541-201ENST00000263351 TMEM95Q3KNT9 176 aa12.48□□□□□ -0.41
ZNF541-201ENST00000263351 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
ZNF541-201ENST00000263351 A0A087WWL8 130 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms