RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 F6UB75 175 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 M0R381 172 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 RPL11P62913 178 aaKnown RBP12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 OCIAD2Q56VL3 154 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 H3BRM9 83 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 C19orf54Q5BKX5 351 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 KLK15Q9H2R5 256 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 MRPL35Q9NZE8 188 aaKnown RBP12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 PKD1L2Q7Z442 2459 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 SIVA1O15304 175 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 Q6ZS46 218 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
TM9SF1-201ENST00000261789 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 A0A0G2JLM5 398 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 GNLYP22749 145 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 GCSHP23434 173 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 LAGE3Q14657 143 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
TM9SF1-201ENST00000261789 FLNCQ14315 2725 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 CFAP46Q8IYW2 2715 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 FXYD2P54710 66 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 DPM2O94777 84 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 SRD5A1P18405 259 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 BLCAPP62952 87 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 HIF1ANQ9NWT6 349 aa12.42□□□□□ -0.42
TM9SF1-201ENST00000261789 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
TM9SF1-201ENST00000261789 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
TM9SF1-201ENST00000261789 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
TM9SF1-201ENST00000261789 EDN2P20800 178 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 TRBV25-1A0A075B6N4 114 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 K7ERJ3 54 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 SAP30O75446 220 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 CHAC1Q9BUX1 264 aa12.4□□□□□ -0.42
TM9SF1-201ENST00000261789 IGHV4-4A0A075B6R2 117 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 GNRH2O43555 120 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 ATP5LO75964 103 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 S100A4P26447 101 aaKnown RBP12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 RNASE4P34096 147 aaKnown RBP12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 DEFB104AQ8WTQ1 72 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 H3BUX3 64 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 PF4V1P10720 104 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 OR10J6PQ8NGY7 276 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 WFDC12Q8WWY7 111 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 VPS25Q9BRG1 176 aa12.39□□□□□ -0.43
TM9SF1-201ENST00000261789 SOCS3O14543 225 aa12.38□□□□□ -0.43
TM9SF1-201ENST00000261789 AGRNO00468 2067 aa12.38□□□□□ -0.43
TM9SF1-201ENST00000261789 COTL1Q14019 142 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 RASL10AQ92737 203 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 PRSS47A8MTI9 375 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 NDUFA4O00483 81 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 MGPP08493 103 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 GTF2H5Q6ZYL4 71 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 LINC00477Q96M19 166 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 ZANQ9Y493 2812 aa12.37□□□□□ -0.43
TM9SF1-201ENST00000261789 A0A1W2PPM0 123 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 K7EP34 96 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 MUC4Q99102 2169 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 A0A087WX48 190 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 TRAV21A0A0B4J279 112 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
TM9SF1-201ENST00000261789 SMIM13P0DJ93 91 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 CRIP2P52943 208 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 SPCS1Q9Y6A9 102 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 ASIPP42127 132 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 MRAP2Q96G30 205 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 RHPN1-AS1Q9BWJ2 59 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 MEGF9Q9H1U4 602 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 NHP2Q9NX24 153 aaKnown RBP12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 LENEPQ9Y5L5 61 aa12.35□□□□□ -0.43
TM9SF1-201ENST00000261789 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
TM9SF1-201ENST00000261789 OVOL1O14753 267 aa12.34□□□□□ -0.43
TM9SF1-201ENST00000261789 IGHG2P01859 326 aa12.34□□□□□ -0.43
TM9SF1-201ENST00000261789 SAMD5Q5TGI4 173 aa12.34□□□□□ -0.43
TM9SF1-201ENST00000261789 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
TM9SF1-201ENST00000261789 DOPEY2Q9Y3R5 2298 aa12.33□□□□□ -0.44
TM9SF1-201ENST00000261789 IGHV4-30-2A0A087WSY4 118 aa12.33□□□□□ -0.44
TM9SF1-201ENST00000261789 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
TM9SF1-201ENST00000261789 SCGB3A1Q96QR1 104 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms