RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 CHCHD5Q9BSY4 110 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 RIF1Q5UIP0 2472 aaKnown RBP6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 IGHV1-3A0A0C4DH29 117 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 C15orf65H3BRN8 121 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 RPL36AP83881 106 aaKnown RBP6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 Q8TAT8 98 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 RPL36ALQ969Q0 106 aaKnown RBP6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 PCDH15Q96QU1 1955 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 IGHV1-69P01742 117 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 CRYGBP07316 175 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 IGHV1-8P0DP01 117 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 GP9P14770 177 aa6.6□□□□□ -1.35
SNCAIP-201ENST00000261367 Q8N976 141 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 FANCMQ8IYD8 2048 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 GVINP1Q7Z2Y8 2422 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 TRBV30A0A0K0K1B3 111 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 NRGNQ92686 78 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 GAFA1Q96PS6 74 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 SPENQ96T58 3664 aaKnown RBP6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 LINC01565O15544 149 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 EFNA4P52798 201 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 MUSTN1Q8IVN3 82 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 FAM167A-AS1Q96KT0 104 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 U3KQK5 164 aa6.59□□□□□ -1.35
SNCAIP-201ENST00000261367 IGKV1D-17A0A075B6S4 117 aa6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 SPAARA0A1B0GVQ0 90 aa6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 GATA4P43694 442 aa6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 C10orf55Q5SWW7 151 aa6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 C17orf82Q86X59 251 aaPredicted RBP6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 PHF3Q92576 2039 aaKnown RBP6.59□□□□□ -1.36
SNCAIP-201ENST00000261367 WISP1O95388 367 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 XGP55808 180 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 Q8TCH9 128 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 LYRM9A8MSI8 78 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 PRR31Q5SQ13 230 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 TNRC6AQ8NDV7 1962 aaKnown RBP6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 ATMQ13315 3056 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 AHCTF1Q8WYP5 2266 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 IGLV2-8P01709 118 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 P0C879 139 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 CCL3L1P16619 93 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 C1orf195Q5TG92 126 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 SLC25A45Q8N413 288 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF524Q96C55 264 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 USMG5Q96IX5 58 aa6.58□□□□□ -1.36
SNCAIP-201ENST00000261367 M0R1W7 72 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 B3GALT5-AS1P59052 145 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 TMEM200BQ69YZ2 307 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 MYO7BQ6PIF6 2116 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV3-23P01764 117 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 ODF3L1Q8IXM7 274 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 HAMPP81172 84 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 RSPO1Q2MKA7 263 aaPredicted RBP6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF503Q96F45 646 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 LINC01587Q99440 93 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 CHD3Q12873 2000 aaKnown RBP6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV1-18A0A0C4DH31 117 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 SAP25Q8TEE9 199 aa6.57□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV3-66A0A0C4DH42 116 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 MLANAQ16655 118 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 TEX36Q5VZQ5 186 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 Q6ZR03 302 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 CACNA1HO95180 2353 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 SRRM4A7MD48 611 aaKnown RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV1-46P01743 117 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 BUB1B-PAK6H3BSN5 160 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 IGKV1-16P04430 117 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 EGR2P11161 476 aaPredicted RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 CFHR1Q03591 330 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 BAALCQ8WXS3 180 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 C10orf142B7Z368 130 aa6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 FAM110DQ8TAY7 271 aaPredicted RBP6.56□□□□□ -1.36
SNCAIP-201ENST00000261367 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 DAND5Q8N907 189 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 DOCK7Q96N67 2140 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 C15orf32Q32M92 178 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 C10orf105Q8TEF2 133 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 CCDC168Q8NDH2 2452 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 TTC28Q96AY4 2481 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHG3P01860 377 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 CRLF1O75462 422 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms