RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LINC00305Q7Z4B0 112 aa12.38□□□□□ -0.43
SDCBP-201ENST00000260130 Q8N976 141 aa12.38□□□□□ -0.43
SDCBP-201ENST00000260130 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
SDCBP-201ENST00000260130 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
SDCBP-201ENST00000260130 RNF24Q9Y225 148 aa12.38□□□□□ -0.43
SDCBP-201ENST00000260130 UBE2G1P62253 170 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 BORCS7Q96B45 105 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 SLAQ13239 276 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
SDCBP-201ENST00000260130 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
SDCBP-201ENST00000260130 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
SDCBP-201ENST00000260130 G0S2P27469 103 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 EPDR1Q9UM22 224 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
SDCBP-201ENST00000260130 CTRLP40313 264 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 ID1P41134 155 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 APOC4P55056 127 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 NBEAL2Q6ZNJ1 2754 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 NIT1Q86X76 327 aa12.36□□□□□ -0.43
SDCBP-201ENST00000260130 SOCS3O14543 225 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
SDCBP-201ENST00000260130 C3orf79P0CE67 100 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 C17orf77Q96MU5 243 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 SAMD13Q5VXD3 122 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 PRR27Q6MZM9 219 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 UQCR10Q9UDW1 63 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
SDCBP-201ENST00000260130 NTF3P20783 257 aa12.34□□□□□ -0.43
SDCBP-201ENST00000260130 STHQ8IWL8 128 aa12.34□□□□□ -0.43
SDCBP-201ENST00000260130 HIGD1CA8MV81 97 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 HSBP1O75506 76 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 PMCHL1Q16048 86 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 FAM19A2Q8N3H0 131 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 C16orf92Q96LL3 132 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 PGPA6NDG6 321 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 GNG5P63218 68 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 GAGE1Q13065 139 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
SDCBP-201ENST00000260130 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 COL5A1-AS1Q5SY13 56 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 FAM162BQ5T6X4 162 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 BPIFA4PQ86YQ2 179 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 FMC1Q96HJ9 113 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 RETNQ9HD89 108 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
SDCBP-201ENST00000260130 DLEU1O43261 78 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 CT83Q5H943 113 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 C5orf17Q8NAS9 161 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 ALKBH7Q9BT30 221 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-201ENST00000260130 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
SDCBP-201ENST00000260130 A0A087X0K7 114 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 BATFQ16520 125 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 GDF5OSQ5U4N7 250 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 TRPT1Q86TN4 253 aaKnown RBP12.31□□□□□ -0.44
SDCBP-201ENST00000260130 RPP21Q9H633 154 aaKnown RBP12.31□□□□□ -0.44
SDCBP-201ENST00000260130 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
SDCBP-201ENST00000260130 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 A8MWL6 223 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 M0R2Z0 102 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 MLST8Q9BVC4 326 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 ZNF492Q9P255 531 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 CAMPP49913 170 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 HBBP68871 147 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
SDCBP-201ENST00000260130 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 TRAV8-2A0A0B4J237 113 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 C20orf202A1L168 122 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 H3BMM0 161 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 LTAP01374 205 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 P01737 135 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
SDCBP-201ENST00000260130 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
SDCBP-201ENST00000260130 DEFB135Q30KP9 77 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
SDCBP-201ENST00000260130 Q6ZN92 141 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 C20orf173Q96LM9 149 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 WWC2-AS2Q96NR7 200 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
SDCBP-201ENST00000260130 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 DEFB1P60022 68 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
SDCBP-201ENST00000260130 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
SDCBP-201ENST00000260130 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms