RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
CCDC90B-201ENST00000260054 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
CCDC90B-201ENST00000260054 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
CCDC90B-201ENST00000260054 LY96Q9Y6Y9 160 aa11.48□□□□□ -0.57
CCDC90B-201ENST00000260054 IGHV3OR16-12A0A075B7B8 117 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 A0A087WWC5 75 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 ZNF705AQ6ZN79 300 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 ISOC2Q96AB3 205 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 RETNQ9HD89 108 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
CCDC90B-201ENST00000260054 FABP5P3A8MUU1 101 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 SH2D1AO60880 128 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 RPL23P62829 140 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 RNF183Q96D59 192 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 RCHY1Q96PM5 261 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 SDF2L1Q9HCN8 221 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 GOLT1BQ9Y3E0 138 aa11.46□□□□□ -0.57
CCDC90B-201ENST00000260054 PRM2P04554 102 aa11.46□□□□□ -0.58
CCDC90B-201ENST00000260054 HOXA5P20719 270 aa11.46□□□□□ -0.58
CCDC90B-201ENST00000260054 MUC21Q5SSG8 566 aa11.46□□□□□ -0.58
CCDC90B-201ENST00000260054 TMEM256Q8N2U0 113 aa11.46□□□□□ -0.58
CCDC90B-201ENST00000260054 LINC01587Q99440 93 aa11.46□□□□□ -0.58
CCDC90B-201ENST00000260054 H7BYZ3 331 aa11.45□□□□□ -0.58
CCDC90B-201ENST00000260054 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
CCDC90B-201ENST00000260054 OVOL2Q9BRP0 275 aa11.45□□□□□ -0.58
CCDC90B-201ENST00000260054 NAGKQ9UJ70 344 aa11.45□□□□□ -0.58
CCDC90B-201ENST00000260054 PRKDCP78527 4128 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-201ENST00000260054 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 SPRY2O43597 315 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 ADIRFQ15847 76 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 X6R8D5 127 aa11.44□□□□□ -0.58
CCDC90B-201ENST00000260054 IGHV1OR15-1A0A075B7D0 117 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 HTN1P15515 57 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 TP53TG1Q9Y2A0 90 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 FAM159AQ6UWV7 190 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
CCDC90B-201ENST00000260054 ORM1P02763 201 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 RPL19P84098 196 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 NUDT10Q8NFP7 164 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 NUDT11Q96G61 164 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 LINC00467Q9BRT7 94 aa11.42□□□□□ -0.58
CCDC90B-201ENST00000260054 AZU1P20160 251 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 S100A2P29034 98 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 ZNF575Q86XF7 245 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 NEU1Q99519 415 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 FBN3Q75N90 2809 aa11.41□□□□□ -0.58
CCDC90B-201ENST00000260054 CBY3A6NI87 242 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 B4DEV8 164 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 GNRH2O43555 120 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 P01737 135 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 ERVFC1-1P60608 527 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 TENM3Q9P273 2699 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
CCDC90B-201ENST00000260054 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.59
CCDC90B-201ENST00000260054 TYMSP04818 313 aa11.4□□□□□ -0.59
CCDC90B-201ENST00000260054 RRN3P1Q2M238 152 aa11.4□□□□□ -0.59
CCDC90B-201ENST00000260054 SFRP2Q96HF1 295 aa11.4□□□□□ -0.59
CCDC90B-201ENST00000260054 KCNS1Q96KK3 526 aa11.4□□□□□ -0.59
CCDC90B-201ENST00000260054 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 SMIM9A6NGZ8 99 aa11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 ELOBQ15370 118 aa11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 RNASE8Q8TDE3 154 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
CCDC90B-201ENST00000260054 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 Q8NAQ8 132 aa11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 RPP21Q9H633 154 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 HUWE1Q7Z6Z7 4374 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-201ENST00000260054 IGHV4-28A0A0C4DH34 117 aa11.37□□□□□ -0.59
CCDC90B-201ENST00000260054 MIFP14174 115 aa11.37□□□□□ -0.59
CCDC90B-201ENST00000260054 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
CCDC90B-201ENST00000260054 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
CCDC90B-201ENST00000260054 TRGV11A0A075B6L2 103 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 IGHV3-16A0A0C4DH30 117 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 PLAC8L1A1L4L8 177 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 DEFB4AO15263 64 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 GZMBP10144 247 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 NDUFA6P56556 154 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms