RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SMIM2Q9BVW6 85 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 TMEM223A0PJW6 202 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 FAM27E3Q08E93 113 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 PDE6HQ13956 83 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 KLHL30-AS1Q8NEE0 82 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 TFF1P04155 84 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 LYPD1Q8N2G4 141 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 MBD6Q96DN6 1003 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 WDR86Q86TI4 376 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 PRB2P02812 416 aaPredicted RBP5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 ENHOQ6UWT2 76 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 FAM223AQ8IWN6 122 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 TMEM75Q8N9X5 138 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 SCN3AQ9NY46 2000 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 ZNF22P17026 224 aaPredicted RBP5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 LINC00158P58513 81 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 MP68P56378 58 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 HCP5Q6MZN7 132 aa5.26□□□□□ -1.57
PDGFRA-201ENST00000257290 DOCK6Q96HP0 2047 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 SS18Q15532 418 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 SPRNQ5BIV9 151 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 C14orf132Q9NPU4 83 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 KNTC1P50748 2209 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 C16orf97H3BN30 126 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 PRB1P04280 392 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 PRB3Q04118 309 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 ATP1A1-AS1Q5TC04 95 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 DEFB108BQ8NET1 73 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 FXYD5Q96DB9 178 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 FGFBP3Q8TAT2 258 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 HELZP42694 1942 aaKnown RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 HEATR1Q9H583 2144 aaKnown RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 COL4A4P53420 1690 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 PRCDQ00LT1 54 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 TOMM6Q96B49 74 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 TRIAP1O43715 76 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 LOXP28300 417 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 RSPO4Q2I0M5 234 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 Q9UF83 564 aa5.25□□□□□ -1.57
PDGFRA-201ENST00000257290 TICRRQ7Z2Z1 1910 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 COX7A2LO14548 114 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 PSPHP1O15172 72 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 MDFIQ99750 246 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 MYLKQ15746 1914 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 ZNF672Q499Z4 452 aaPredicted RBP5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 TOMM7Q9P0U1 55 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 PRRC2BQ5JSZ5 2229 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 IGKV3D-20A0A0C4DH25 116 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 H7C423 109 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 RSPO1Q2MKA7 263 aaPredicted RBP5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 IGHV3-48P01763 117 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 RFPL3SP0C7P2 107 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 C11orf1Q9H5F2 150 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 MTCL1Q9Y4B5 1905 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 IGHV1-69DA0A0B4J2H0 117 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 GDF5OSQ5U4N7 250 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 ESM1Q9NQ30 184 aa5.24□□□□□ -1.57
PDGFRA-201ENST00000257290 GTF3C1Q12789 2109 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 PDE4DIPQ5VU43 2346 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 LST1O00453 97 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 PIP4P1Q86T03 277 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 SBSPONQ8IVN8 264 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 HOXD3P31249 432 aaPredicted RBP5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 CEMP1Q6PRD7 247 aaPredicted RBP5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 SMCPP49901 116 aaPredicted RBP5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 TMEM61Q8N0U2 210 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 MYOFQ9NZM1 2061 aa5.23□□□□□ -1.57
PDGFRA-201ENST00000257290 SPRY2O43597 315 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 CCKP06307 115 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 ANAPC1Q9H1A4 1944 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 C5orf63A6NC05 138 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 DYSFO75923 2080 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 UBE2D1P51668 147 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 DIDO1Q9BTC0 2240 aaKnown RBP5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 C11orf86A6NJI1 115 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 TMEM30BQ3MIR4 351 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 TRBV6-6A0A0A6YYG2 114 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 A0A0G2JNJ9 132 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 A0A0J9YY99 117 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 RPL36AP83881 106 aaKnown RBP5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 Q9UFV3 132 aa5.22□□□□□ -1.57
PDGFRA-201ENST00000257290 KIAA1671Q9BY89 1806 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 LY6G6EA0A0G2JKS1 128 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 CFHR3Q02985 330 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 PVRIGQ6DKI7 326 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 ZNF497Q6ZNH5 498 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 LCA10Q71F78 164 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 U3KQA8 63 aa5.21□□□□□ -1.57
PDGFRA-201ENST00000257290 PDE6GP18545 87 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR20EP86478 221 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR20CP86479 221 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR20DP86480 221 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR20BP86481 221 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms