RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 LINC00310P59036 64 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 F6UB75 175 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 CIRBPQ14011 172 aaKnown RBP3.61□□□□□ -1.83
VPS13C-201ENST00000249837 ANXA2RQ3ZCQ2 193 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 CENPEQ02224 2701 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 A0A1W2PRX2 142 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 A8MWV9 139 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 CDKN1BP46527 198 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 C1orf159Q96HA4 380 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 PGPEP1Q9NXJ5 209 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 KAAG1Q9UBP8 84 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 Q8N7P7 452 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 TRAV8-2A0A0B4J237 113 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 SPATA12Q7Z6I5 190 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 LINC01559Q495D7 138 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 RNASE1P07998 156 aaKnown RBP3.61□□□□□ -1.83
VPS13C-201ENST00000249837 DYNAPQ8N1N2 210 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 C8orf31Q8N9H6 132 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 C2orf66Q6UXQ4 117 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 C19orf71A6NCJ1 209 aa3.61□□□□□ -1.83
VPS13C-201ENST00000249837 A0A1B0GV72 72 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 CRYGCP07315 174 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 KLK9Q9UKQ9 250 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 WFDC2Q14508 124 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 SH2D6Q7Z4S9 175 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 SNCGO76070 127 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 ETDBQ3ZM63 59 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 PRSS29PA6NIE9 313 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 UBE2L6O14933 153 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 PRSS22Q9GZN4 317 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 OVOL3O00110 214 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 GNRH2O43555 120 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 CKS1BP61024 79 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 CD28P10747 220 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 TMEM95Q3KNT9 176 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 DTX2Q86UW9 622 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 FAM110DQ8TAY7 271 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-201ENST00000249837 DLX4Q92988 240 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-201ENST00000249837 PLEKHB2Q96CS7 222 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 TEX48A0A1B0GUV7 120 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 UBE2E1P51965 193 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 SPINK13Q1W4C9 94 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 SMIM2Q9BVW6 85 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 TP53TG1Q9Y2A0 90 aa3.6□□□□□ -1.83
VPS13C-201ENST00000249837 GNLYP22749 145 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 MYMXA0A1B0GTQ4 84 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 DUSP14O95147 198 aaKnown RBP3.59□□□□□ -1.83
VPS13C-201ENST00000249837 FXYD2P54710 66 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 Q8N976 141 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 FANCD2OSQ96PS1 177 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 MLST8Q9BVC4 326 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 IGLV11-55A0A075B6I3 123 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 DNAH12Q6ZR08 3092 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 H3BMG7 143 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 NDUFS8O00217 210 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 CTSGP08311 255 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 F8VRH5 84 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 HLA-DRB4P13762 266 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 CTRLP40313 264 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 HLA-DRB4X5D2U9 266 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 UTRNP46939 3433 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 ADARB2-AS1A8MUL3 147 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 SYNJ2BPP57105 145 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 C12orf74Q32Q52 190 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 BPESC1Q9GZL8 116 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 CEP350Q5VT06 3117 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 AZU1P20160 251 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 OR13C6PQ8NH95 151 aa3.59□□□□□ -1.83
VPS13C-201ENST00000249837 TRAV12-2A0A075B6T6 113 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 INS-IGF2F8WCM5 200 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 MAPK1IP1LQ8NDC0 245 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 PHLDA1Q8WV24 401 aaPredicted RBP3.59□□□□□ -1.84
VPS13C-201ENST00000249837 TMEM262E9PQX1 116 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 A0A087WX48 190 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 IGHV7-81A0A0B4J1V7 117 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 IGLL5B9A064 214 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 IGHV3-53P01767 116 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 WI2-2373I1.2A0A1W2PRP0 233 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 BOD1L2Q8IYS8 172 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 TMEM101Q96IK0 257 aa3.59□□□□□ -1.84
VPS13C-201ENST00000249837 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 IGLV1-47P01700 117 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 ZFP36P26651 326 aaKnown RBP3.58□□□□□ -1.84
VPS13C-201ENST00000249837 CFHR4Q92496 578 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 ZNF80P51504 273 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-201ENST00000249837 TRBV25-1A0A075B6N4 114 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 IGHV7-4-1A0A0J9YVY3 117 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 LINC01548A6NM66 108 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 ODF1Q14990 250 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 MSRB2Q9Y3D2 182 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 C9JAW5 83 aa3.58□□□□□ -1.84
VPS13C-201ENST00000249837 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms