RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 WFDC3Q8IUB2 231 aa16.37■□□□□ 0.21
CLN6-201ENST00000249806 TLN2Q9Y4G6 2542 aa16.36■□□□□ 0.21
CLN6-201ENST00000249806 H3BVH4 76 aa16.36■□□□□ 0.21
CLN6-201ENST00000249806 HOXA3O43365 443 aaPredicted RBP16.36■□□□□ 0.21
CLN6-201ENST00000249806 LINC00469Q8N7U9 141 aa16.35■□□□□ 0.21
CLN6-201ENST00000249806 Q96MF0 132 aa16.35■□□□□ 0.21
CLN6-201ENST00000249806 SPRY2O43597 315 aa16.35■□□□□ 0.21
CLN6-201ENST00000249806 HNRNPA3P51991 378 aaKnown RBP16.35■□□□□ 0.21
CLN6-201ENST00000249806 TNFRSF6BO95407 300 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 PPBPP02775 128 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 RNASE4P34096 147 aaKnown RBP16.34■□□□□ 0.21
CLN6-201ENST00000249806 SPANXN1Q5VSR9 72 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 MRPL52Q86TS9 123 aaKnown RBP16.34■□□□□ 0.21
CLN6-201ENST00000249806 TP73-AS1Q9UF72 201 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
CLN6-201ENST00000249806 LINC01545Q5VT33 79 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 FAM19A4Q96LR4 140 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 DUX5Q96PT3 197 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 ZNF702PQ9H963 129 aa16.34■□□□□ 0.21
CLN6-201ENST00000249806 SNAI2O43623 268 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 TSPOP30536 169 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 DCANP1Q8TF63 244 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 MAP1LC3AQ9H492 121 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 UFC1Q9Y3C8 167 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 TRAV21A0A0B4J279 112 aa16.33■□□□□ 0.2
CLN6-201ENST00000249806 TMEM89A2RUT3 159 aa16.32■□□□□ 0.2
CLN6-201ENST00000249806 TRAV26-2A0A0B4J265 109 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 HBDP02042 147 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 TFPI2P48307 235 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 LRRC75A-AS1Q8N1F1 130 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 IGHV4-4A0A075B6R2 117 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 ANXA2RQ3ZCQ2 193 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 WFDC12Q8WWY7 111 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 TENM4Q6N022 2769 aa16.31■□□□□ 0.2
CLN6-201ENST00000249806 SYNJ2BPP57105 145 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 SMIM15Q7Z3B0 74 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 KRTAP1-3Q8IUG1 177 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 LAMTOR2Q9Y2Q5 125 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 SORL1Q92673 2214 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
CLN6-201ENST00000249806 ST20Q9HBF5 79 aa16.29■□□□□ 0.2
CLN6-201ENST00000249806 ITPR3Q14573 2671 aa16.29■□□□□ 0.2
CLN6-201ENST00000249806 GNRH2O43555 120 aa16.29■□□□□ 0.2
CLN6-201ENST00000249806 CACNG7P62955 275 aa16.29■□□□□ 0.2
CLN6-201ENST00000249806 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
CLN6-201ENST00000249806 IGHV4OR15-8A0A075B7B6 117 aa16.28■□□□□ 0.2
CLN6-201ENST00000249806 A0A087WW49 117 aa16.28■□□□□ 0.2
CLN6-201ENST00000249806 M0R381 172 aa16.28■□□□□ 0.2
CLN6-201ENST00000249806 S100A4P26447 101 aaKnown RBP16.28■□□□□ 0.2
CLN6-201ENST00000249806 ID1P41134 155 aa16.28■□□□□ 0.2
CLN6-201ENST00000249806 HSBP1L1C9JCN9 74 aa16.27■□□□□ 0.2
CLN6-201ENST00000249806 APRG1Q8IVJ8 170 aa16.27■□□□□ 0.2
CLN6-201ENST00000249806 OR2K2Q8NGT1 345 aa16.27■□□□□ 0.2
CLN6-201ENST00000249806 ELANEP08246 267 aa16.27■□□□□ 0.19
CLN6-201ENST00000249806 LGALS1P09382 135 aaKnown RBP16.27■□□□□ 0.19
CLN6-201ENST00000249806 SONP18583 2426 aaKnown RBP16.27■□□□□ 0.19
CLN6-201ENST00000249806 ZNF688P0C7X2 276 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 MYOZ3Q8TDC0 251 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 MRPS16Q9Y3D3 137 aaKnown RBP16.26■□□□□ 0.19
CLN6-201ENST00000249806 CHD6Q8TD26 2715 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 TCAPO15273 167 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 LEPP41159 167 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 ASIPP42127 132 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 NRACQ8N912 160 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 IFI27L1Q96BM0 104 aa16.26■□□□□ 0.19
CLN6-201ENST00000249806 NXT2Q9NPJ8 142 aaKnown RBP16.26■□□□□ 0.19
CLN6-201ENST00000249806 CCDC168Q8NDH2 2452 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 AGRNO00468 2067 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 LINC01546A6NGU7 62 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 HIST2H2BCQ6DN03 193 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 STPG4Q8N801 248 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 C18orf15Q96N68 181 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 HOXD3P31249 432 aaPredicted RBP16.25■□□□□ 0.19
CLN6-201ENST00000249806 HINT1P49773 126 aaPredicted RBP16.25■□□□□ 0.19
CLN6-201ENST00000249806 PSMG4Q5JS54 123 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 UBE2E2Q96LR5 201 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 PHLDA3Q9Y5J5 127 aa16.25■□□□□ 0.19
CLN6-201ENST00000249806 IGLV2-18A0A075B6J9 118 aa16.24■□□□□ 0.19
CLN6-201ENST00000249806 TRBV7-9A0A0J9YWB2 115 aa16.24■□□□□ 0.19
CLN6-201ENST00000249806 C18orf65Q6ZTR6 163 aa16.24■□□□□ 0.19
CLN6-201ENST00000249806 GOLT1BQ9Y3E0 138 aa16.24■□□□□ 0.19
CLN6-201ENST00000249806 KLLNB2CW77 178 aa16.23■□□□□ 0.19
CLN6-201ENST00000249806 RNASE3P12724 160 aaKnown RBP16.23■□□□□ 0.19
CLN6-201ENST00000249806 SCRT2Q9NQ03 307 aa16.23■□□□□ 0.19
CLN6-201ENST00000249806 MUC4Q99102 2169 aa16.23■□□□□ 0.19
CLN6-201ENST00000249806 Q8N8P6 123 aa16.23■□□□□ 0.19
CLN6-201ENST00000249806 CUBNO60494 3623 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 FCER1GP30273 86 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 DEFB136Q30KP8 78 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 IGKV3-20P01619 116 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 LGALS9BQ3B8N2 356 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 COL5A1-AS1Q5SY13 56 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 LGALS9CQ6DKI2 356 aa16.22■□□□□ 0.19
CLN6-201ENST00000249806 C14orf178Q8N769 122 aaPredicted RBP16.22■□□□□ 0.19
CLN6-201ENST00000249806 SAMD13Q5VXD3 122 aa16.21■□□□□ 0.19
CLN6-201ENST00000249806 SLC25A34Q6PIV7 304 aa16.21■□□□□ 0.19
CLN6-201ENST00000249806 TMEM158Q8WZ71 300 aa16.21■□□□□ 0.19
CLN6-201ENST00000249806 LGALS9O00182 355 aa16.21■□□□□ 0.18
CLN6-201ENST00000249806 G0S2P27469 103 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms