RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 DNLZQ5SXM8 178 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 ATRAIDQ6UW56 229 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 SRD5A3Q9H8P0 318 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 A0A1W2PPQ1 181 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 SMIM27A0A1W2PRY6 76 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 G3V4G9 280 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 M0R2Z0 102 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 S100PP25815 95 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 RPL19P84098 196 aaKnown RBP9.48□□□□□ -0.89
LSM8-201ENST00000249299 BTN1A1Q13410 526 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 PRR9Q5T870 116 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 KCNIP4Q6PIL6 250 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 PYGO2Q9BRQ0 406 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 TP53TG3Q9ULZ0 132 aa9.48□□□□□ -0.89
LSM8-201ENST00000249299 TMEM238LA0A1B0GVL6 79 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 ORM1P02763 201 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 WFDC10AQ9H1F0 79 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 MGAM2Q2M2H8 2515 aa9.47□□□□□ -0.89
LSM8-201ENST00000249299 TRAV12-3A0A0B4J271 114 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 IGKV3D-20A0A0C4DH25 116 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 F2Z2F3 143 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.9
LSM8-201ENST00000249299 IGHV4-30-4P0DP06 118 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 NAT8BQ9UHF3 227 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 GOLT1BQ9Y3E0 138 aa9.46□□□□□ -0.9
LSM8-201ENST00000249299 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
LSM8-201ENST00000249299 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
LSM8-201ENST00000249299 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
LSM8-201ENST00000249299 CSNK1G2-AS1Q8NCQ2 148 aa9.45□□□□□ -0.9
LSM8-201ENST00000249299 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
LSM8-201ENST00000249299 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 A0A1B0GW15 77 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 J3KRW8 73 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
LSM8-201ENST00000249299 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
LSM8-201ENST00000249299 ATP5L2Q7Z4Y8 100 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 NEU1Q99519 415 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
LSM8-201ENST00000249299 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
LSM8-201ENST00000249299 HIGD1CA8MV81 97 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 CTRLP40313 264 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 ASIPP42127 132 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 COX19Q49B96 90 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
LSM8-201ENST00000249299 Q6ZWC4 215 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
LSM8-201ENST00000249299 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 SNAI2O43623 268 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 FXYD7P58549 80 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 ELOBQ15370 118 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 FER1L6-AS1Q8NA97 138 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 GTSF1Q8WW33 167 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 PTH2Q96A98 100 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 LINC01587Q99440 93 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
LSM8-201ENST00000249299 IGHV4-4A0A075B6R2 117 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 TYMSP04818 313 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
LSM8-201ENST00000249299 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
LSM8-201ENST00000249299 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
LSM8-201ENST00000249299 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 BORCS7Q96B45 105 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 AGRNO00468 2067 aa9.41□□□□□ -0.9
LSM8-201ENST00000249299 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 A0A1B0GUT8 65 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 S100A8P05109 93 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 CACNG7P62955 275 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 RIGQ13278 110 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 MUC21Q5SSG8 566 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 Q6ZQT7 251 aa9.4□□□□□ -0.9
LSM8-201ENST00000249299 CMYA5Q8N3K9 4069 aa9.4□□□□□ -0.91
LSM8-201ENST00000249299 TMSB15BA0A087X1C1 80 aa9.39□□□□□ -0.91
LSM8-201ENST00000249299 CBY3A6NI87 242 aa9.39□□□□□ -0.91
LSM8-201ENST00000249299 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms