RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 NDUFS8O00217 210 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 SIVA1O15304 175 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 IGF1P05019 195 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 ODF1Q14990 250 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 CLEC2AQ6UVW9 174 aa10.96□□□□□ -0.66
HIF3A-202ENST00000244303 H3BVH4 76 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 J3KRW8 73 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 PRSS1P07477 247 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 LY6EQ16553 131 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 NRACQ8N912 160 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 IGHV4-30-2A0A087WSY4 118 aa10.95□□□□□ -0.66
HIF3A-202ENST00000244303 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
HIF3A-202ENST00000244303 TM4SF20Q53R12 229 aa10.94□□□□□ -0.66
HIF3A-202ENST00000244303 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
HIF3A-202ENST00000244303 SPCS1Q9Y6A9 102 aa10.94□□□□□ -0.66
HIF3A-202ENST00000244303 IGHV4-4A0A075B6R2 117 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 G3V4G9 280 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 FOXC2Q99958 501 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 NDUFA4O00483 81 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 DEFB1P60022 68 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
HIF3A-202ENST00000244303 CFAP46Q8IYW2 2715 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 SMIM17P0DL12 118 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 FABP2P12104 132 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 LENEPQ9Y5L5 61 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 SOCS3O14543 225 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 IGKCP01834 107 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 GCSHP23434 173 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 LAGE3Q14657 143 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
HIF3A-202ENST00000244303 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 H3BUX3 64 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 SPRY2O43597 315 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 IGHG2P01859 326 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 OR10J6PQ8NGY7 276 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 KLK15Q9H2R5 256 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 ATP5LO75964 103 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 SAMD5Q5TGI4 173 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
HIF3A-202ENST00000244303 IGSF10Q6WRI0 2623 aa10.9□□□□□ -0.66
HIF3A-202ENST00000244303 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
HIF3A-202ENST00000244303 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.66
HIF3A-202ENST00000244303 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 OVOL1O14753 267 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 MSMBP08118 114 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 PF4V1P10720 104 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 BLCAPP62952 87 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 Q6ZS46 218 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 NRGNQ92686 78 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 DOPEY1Q5JWR5 2465 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 A6NDX4 124 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 F6UB75 175 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 M0R381 172 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 DPM2O94777 84 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 PRB1P04280 392 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 MYOZ3Q8TDC0 251 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 MAP1AP78559 2803 aaPredicted RBP10.89□□□□□ -0.67
HIF3A-202ENST00000244303 ACACBO00763 2458 aa10.89□□□□□ -0.67
HIF3A-202ENST00000244303 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 H3BUA1 57 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
HIF3A-202ENST00000244303 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 CELSR2Q9HCU4 2923 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
HIF3A-202ENST00000244303 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.67
HIF3A-202ENST00000244303 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
HIF3A-202ENST00000244303 MRPL35Q9NZE8 188 aaKnown RBP10.88□□□□□ -0.67
HIF3A-202ENST00000244303 BRI3O95415 125 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 SMIM2Q9BVW6 85 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
HIF3A-202ENST00000244303 ASIPP42127 132 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 FAM19A4Q96LR4 140 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
HIF3A-202ENST00000244303 FXYD2P54710 66 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 USP9XQ93008 2570 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-202ENST00000244303 B4DSR2 109 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 K7ERJ3 54 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-202ENST00000244303 RASL10AQ92737 203 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms