RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 ZNF56Q15929 161 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 OR4C13Q8NGP0 309 aa11.74□□□□□ -0.53
HOXC12-201ENST00000243103 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
HOXC12-201ENST00000243103 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
HOXC12-201ENST00000243103 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
HOXC12-201ENST00000243103 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
HOXC12-201ENST00000243103 KLF12Q9Y4X4 402 aa11.74□□□□□ -0.53
HOXC12-201ENST00000243103 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 PPP1R27Q86WC6 154 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 IFITM1P13164 125 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 DEFB1P60022 68 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 TCF15Q12870 199 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 DTX2Q86UW9 622 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 LINC01560Q8TB33 94 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 KLK5Q9Y337 293 aaPredicted RBP11.73□□□□□ -0.53
HOXC12-201ENST00000243103 TRAV17A0A0B4J275 112 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 MYCNOSP40205 109 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 SEM1Q6ZVN7 128 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
HOXC12-201ENST00000243103 CT83Q5H943 113 aa11.72□□□□□ -0.53
HOXC12-201ENST00000243103 DKK4Q9UBT3 224 aa11.72□□□□□ -0.53
HOXC12-201ENST00000243103 MYMXA0A1B0GTQ4 84 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 TEN1Q86WV5 123 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 H7C1H1 209 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 SLC25A20O43772 301 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 MZT1Q08AG7 82 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 DUX3Q96PT4 197 aa11.71□□□□□ -0.53
HOXC12-201ENST00000243103 HERVK_113P61574 105 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 ITPR1Q14643 2758 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 TRBV19A0A075B6N1 114 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 IGKV3-15P01624 115 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
HOXC12-201ENST00000243103 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
HOXC12-201ENST00000243103 YAE1D1Q9NRH1 226 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 LGALS1P09382 135 aaKnown RBP11.7□□□□□ -0.54
HOXC12-201ENST00000243103 GLRXP35754 106 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
HOXC12-201ENST00000243103 F5H697 171 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 FSTL3O95633 263 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 RPL11P62913 178 aaKnown RBP11.69□□□□□ -0.54
HOXC12-201ENST00000243103 Q6ZS46 218 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 RAB9BQ9NP90 201 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 GRNP28799 593 aaKnown RBP11.69□□□□□ -0.54
HOXC12-201ENST00000243103 ADIPOQQ15848 244 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 FLNCQ14315 2725 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 CELSR2Q9HCU4 2923 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
HOXC12-201ENST00000243103 IGHV3OR16-10A0A075B7F0 116 aa11.68□□□□□ -0.54
HOXC12-201ENST00000243103 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
HOXC12-201ENST00000243103 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
HOXC12-201ENST00000243103 NAV2Q8IVL1 2488 aa11.68□□□□□ -0.54
HOXC12-201ENST00000243103 PRAC2D3DTV9 90 aa11.68□□□□□ -0.54
HOXC12-201ENST00000243103 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
HOXC12-201ENST00000243103 C14orf178Q8N769 122 aaPredicted RBP11.68□□□□□ -0.54
HOXC12-201ENST00000243103 LAGE3Q14657 143 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 A6NJY4 79 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 FOXC1Q12948 553 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 SIGLEC15Q6ZMC9 328 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 MTORP42345 2549 aa11.67□□□□□ -0.54
HOXC12-201ENST00000243103 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 ATP5LO75964 103 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 FAM215AQ9Y5M1 114 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 DLX6P56179 175 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
HOXC12-201ENST00000243103 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 TM4SF5O14894 197 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 TMEM200BQ69YZ2 307 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 Q6ZSV7 163 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 GAFA1Q96PS6 74 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
HOXC12-201ENST00000243103 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
HOXC12-201ENST00000243103 TNRC6BQ9UPQ9 1833 aaKnown RBP11.65□□□□□ -0.54
HOXC12-201ENST00000243103 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.55
HOXC12-201ENST00000243103 CFHR4Q92496 578 aa11.65□□□□□ -0.55
HOXC12-201ENST00000243103 PRR25Q96S07 402 aa11.65□□□□□ -0.55
HOXC12-201ENST00000243103 CGB3P0DN86 165 aa11.64□□□□□ -0.55
HOXC12-201ENST00000243103 CGB7P0DN87 165 aa11.64□□□□□ -0.55
HOXC12-201ENST00000243103 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
HOXC12-201ENST00000243103 OOSP1A8MZH6 123 aa11.64□□□□□ -0.55
HOXC12-201ENST00000243103 POU2AF1Q16633 256 aa11.64□□□□□ -0.55
HOXC12-201ENST00000243103 OPRPNQ99935 248 aaPredicted RBP11.64□□□□□ -0.55
HOXC12-201ENST00000243103 TRBV7-3A0A075B6L6 115 aa11.63□□□□□ -0.55
HOXC12-201ENST00000243103 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
HOXC12-201ENST00000243103 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
HOXC12-201ENST00000243103 ELANEP08246 267 aa11.63□□□□□ -0.55
HOXC12-201ENST00000243103 NDPQ00604 133 aa11.63□□□□□ -0.55
HOXC12-201ENST00000243103 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms